Gene Xfasm12_0715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0715 
Symbolcca 
ID6120477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp766876 
End bp768126 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content55% 
IMG OID641648775 
Productmultifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 
Protein accessionYP_001775340 
Protein GI170729907 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGCT ATCTTGTAGG TGGTGCCGTC CGCGACGCAT TACTCGGTCA GCCTGCTGGC 
GACTGCGACT GGGTCGTCGT TGGTGCCGAC CCAGCACACA TGAAGAGTTT GGGTTTTAAG
CCAGTAGGCC GTGACTTTCC TGTGTTCCTA CACCCCAAGA CCGGCGAAGA ATTCGCACTA
GCACGTACCG AGCGCAAAAA CGGCCACGGC TACCGCGGCT TTATCGTCAA CGCTGACCCA
ACTGTCACGC TTGAACAAGA TCTGCAACGC CGTGACTTCA CCATTAATGC GATCGCACGT
GACCAAACCA ATAGCACATT GATCGACCCC TATGGTGGCG TGAATGATCT TGAGCAACGT
GTATTGCGCC ATATTAGCCC CGCATTTGCC GAGGACCCGT TGCGCGTGCT GCGTGCAGCA
CGCTTTATGG CACGGTTGGC ACCTTTGGGC TTCAGCATTG CTCCTGAAAC ACTGGCAATG
ATGCGTCAGA TGGTTGCAAA CGGCGAACTC AACAGCTTGA TACCCGAAAG AATATGGAAG
GAATTAAGCC GATCCCTGGC CTACACACAA CCAGCGGCCT TCCTCCATAC ACTACGCACA
GTGAATGCAC TGGAGGTGGT GTTACCCGAA TTAAACGCAT TGTATGGGGT ACCACAACAC
GCAGACTATC ACCCGGAAAT CGACACCGGC CTCCACCAAG AATTGGTCAG CGATATAGCT
GCAAAGCTGG CACCAGGCGA TATGCTGATC GGCTTCGCAG CGCTATGTCA CGACCTCGGA
AAAGCCCTGA CACCACGCGC AACATGGCCT CATCATCCGA TGCACGAACA ACGCGGGATG
GCACCGACAC AACAGCTCAG TGAACGCCTG AAAGTCCCCC GGGATTACCA GCAACTCGCA
TTGATCGCCT GCCGCGAACA CCTCAACGTA CACCGTCTGT CAAAGTTGCA TGACCATACC
GTATACGAAC TGCTGCAACG CTGTGATGCC TTCCGCCGCC CCGAACGGAT CGCACAACTT
GCGATCGTTT GCGAAGCCGA TTATCGAGGG CGCTATGGAC ATGAAGATGC TAACTACCCA
CAAGGACAAC ATTTATGCCG ACTGCACGCC GCAGCGTTGG CAGTCAACGC ACGTGACCTT
AATAGACAAG ATTTACACGG TACACAAATC GGCGAAGCGC TGGCTCAAGC ACGCATCCGT
GCGATCAGCT CAGCTGGTGT CTATGATGGG GGAACGGGAA CAAATTTCTG A
 
Protein sequence
MKSYLVGGAV RDALLGQPAG DCDWVVVGAD PAHMKSLGFK PVGRDFPVFL HPKTGEEFAL 
ARTERKNGHG YRGFIVNADP TVTLEQDLQR RDFTINAIAR DQTNSTLIDP YGGVNDLEQR
VLRHISPAFA EDPLRVLRAA RFMARLAPLG FSIAPETLAM MRQMVANGEL NSLIPERIWK
ELSRSLAYTQ PAAFLHTLRT VNALEVVLPE LNALYGVPQH ADYHPEIDTG LHQELVSDIA
AKLAPGDMLI GFAALCHDLG KALTPRATWP HHPMHEQRGM APTQQLSERL KVPRDYQQLA
LIACREHLNV HRLSKLHDHT VYELLQRCDA FRRPERIAQL AIVCEADYRG RYGHEDANYP
QGQHLCRLHA AALAVNARDL NRQDLHGTQI GEALAQARIR AISSAGVYDG GTGTNF