| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0612 |
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| Symbol | |
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| ID | 6120376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 672368 |
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| End bp | 674257 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641648681 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001775246 |
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| Protein GI | 170729813 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTCCC GCTATAACGC CGCAGACATC GAAGTTCTCA CTGGCCTGGA CCCAGTCAAA
CGCCGCCCCG GGATGTATAC CGATACGACA CGTCCCAACC ATCTGGCACA GGAAGTTATT
GACAATTCAG TAGACGAGGC ACTTGCAGGC TACGCGAATC GAATTGAAGT CACACTCTAC
AAAGACGGTA GCTGCGAAGT CGCCGACAAC GGTCGTGGCA TGCCAGTGGA TATTCACCCA
GAAGAGAAGA TTCCCGGCGT GGAATTGATC CTGACCAGGC TACACGCTGG CGGCAAATTT
AGTAATCGCA ACTACACCTT TTCTGGCGGA TTGCACGGCG TAGGCGTGAG CGTGGTCAAC
GCACTGTCCA GTAAAGTTGA TCTCTTCATC AAACGCGAAG GTAGCGAACA CCACATGGAA
TTTCGCGAAG GCTTTGCCGT ATCCAAATTG AAAGTACTCG GCACAGTCAG CAAAAAAAAT
ACCGGTACAC GTCTGCGCTT CTGGCCGGAT TCAAAATACT TCGACACCCC TAAATTCAAC
GTACGTGTAT TGCGCCATCT ACTGCGTGCC AAAGCGGTCC TCTGCCCCGG TTTGACAGTC
GAATTACTCG AAGAGGCCAC AGGAGAGATC AACACATGGC ACTTCAAAGA CGGCTTACGC
GACTACCTTA AAGGCGAAAT GACCGAAAGT GAACTGCTGC CTGCCGAGCT GTTCATTGGC
TGCCTGAAGA AAGATACCGA AGTAGTGGAC TGGGCGGTCG CCTGGGTCCC CGAAGGAGAA
CTCACTCAAG AAAGCTACGT TAACCTGATC CCTACCCCAC AACATGGCAC CCACGTCAAT
GGACTGCGCT CAGGATTAAC CGACGCGCTA CGCGAATTCT GTGACTTCCG CAATCTACTG
CCACGCGGAA TCAAACTGGC GCCGGAAGAT GTCTGGGATC GTGTCACTTT TGTGCTGTCG
CTGAAAATGA GTGACCCCCA GTTCTCCGGT CAAACCAAGG AACGCTTATC TTCACGCCAA
GCAGCTGGTT TCATTGAAAG CACAGTGCAT GACGCCTTCA GCCTATGGTT AAACCAGAAC
GTAGACATTG GCGAACACAT TGCGCAGATC GCTATTGAAC GTGCCAGCGC ACGTCTGAAA
ACCGAAAAAC AAGTCACCCG AAAGAAAATC ACCCATGGCC CCGCACTCCC CGGAAAATTA
GCCGACTGCA TCAGCCTGGA CCTGTCACGC ACAGAACTGT TCCTGGTAGA AGGCGACTCG
GCCGGAGGCA GCGCCAAACA AGCACGGGAC AAAGATTTCC AAGCGATCCT GCCGTTACGC
GGCAAAATCC TCAACACATG GGAAGTCGCC TCCGGCAGCG TCCTCGCCTC CGATGAAGTG
CATAACCTGG CAATCGCAAT CGGCTGCGAC CCTGGCAAAG ACAATCTCTC AGGATTGCGC
TACGGCAAAA TCGTCATCCT GGCCGACGCC GACTCCGACG GCCTACACAT CGCCACCCTG
CTTACCGCAC TATTCCTCAA ACACTTCCCC GGGCTCGTTG CAGCCGGTCA CGTGTTCGTG
GCAATGCCTC CCCTGTTCCG GGTCGACGTA GGCAAGCAAG TGTTTTATGC ACTAGACGAT
GAAGAAAAGA CCATACTGCT GGAAAAGATA CAGCGTGAAA AAATCAAGGG ACAAGTCAGC
GTCACCCGCT TCAAAGGCCT AGGAGAAATG AACCCGCAGC AACTACGCGA ATCCACCATT
CATCCAGATA CACGCCGCCT CGTACAACTG ACCATGGATG ACAACACCCA GACTTGCTCA
CTGATGGACA TGCTACTAGC CAAAAAACGC GCAAGCGATC GGAAACAATG GCTGGAAACC
AAAGGTAACT TAGCGTCACT AGACATCTAG
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| Protein sequence | MNSRYNAADI EVLTGLDPVK RRPGMYTDTT RPNHLAQEVI DNSVDEALAG YANRIEVTLY
KDGSCEVADN GRGMPVDIHP EEKIPGVELI LTRLHAGGKF SNRNYTFSGG LHGVGVSVVN
ALSSKVDLFI KREGSEHHME FREGFAVSKL KVLGTVSKKN TGTRLRFWPD SKYFDTPKFN
VRVLRHLLRA KAVLCPGLTV ELLEEATGEI NTWHFKDGLR DYLKGEMTES ELLPAELFIG
CLKKDTEVVD WAVAWVPEGE LTQESYVNLI PTPQHGTHVN GLRSGLTDAL REFCDFRNLL
PRGIKLAPED VWDRVTFVLS LKMSDPQFSG QTKERLSSRQ AAGFIESTVH DAFSLWLNQN
VDIGEHIAQI AIERASARLK TEKQVTRKKI THGPALPGKL ADCISLDLSR TELFLVEGDS
AGGSAKQARD KDFQAILPLR GKILNTWEVA SGSVLASDEV HNLAIAIGCD PGKDNLSGLR
YGKIVILADA DSDGLHIATL LTALFLKHFP GLVAAGHVFV AMPPLFRVDV GKQVFYALDD
EEKTILLEKI QREKIKGQVS VTRFKGLGEM NPQQLRESTI HPDTRRLVQL TMDDNTQTCS
LMDMLLAKKR ASDRKQWLET KGNLASLDI
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