| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0597 |
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| Symbol | |
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| ID | 6120361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 655058 |
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| End bp | 657250 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641648666 |
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| Product | hypothetical protein |
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| Protein accession | YP_001775231 |
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| Protein GI | 170729798 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5563] Predicted integral membrane proteins containing uncharacterized repeats |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.094399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGAA AGAATCATAA AAAAACAACA TTAGCCACAC TCATCTCCGT GCTACTGATG
GGAGGCGCCG GTGCCACCTA TGCAAACTCG GCATCCATAT CGGAGAAACT AGATTTGGCG
ACACAGCATC TTGATGGTGC TGCATCCACT GGCGAAGCAA TCTCCTCCGA TGGGAAAACC
ATCGCAACAT CCATCAATAA TCGTACTCGT GCATTCCTGT TATCCGGTGA CAATTGGGCA
ACAAAAACCG AGCTTGGCTC ATTAAAAAGC GATAGTTCAG GTACTTCTAT TGTTAGAGCG
CTCTCTGCGG ATGGAAAAAT CGCTGCGGGA ATATCCTCAG TTGATTCCAG TTCTACTCAA
CTGCATGCAA CCATTTGGTC AGGCGACAAC TGGGCAACAA AAACGACTCT CGGAACGTTA
GCAACAAATA ACGGGGGTGA CTCTGTTGTT TACGCACTCT CCGCCGATGG GAAAGTCGCT
GCAGGACAAA CCGCAGCCTC GACAGGTACT CTTCATGCGG TTATCTGGTC GGGAGACAAT
TGGGCAACAA AAACCGACCT CGGAACAATA AGAAGCGATG GTGCAGGTGA TTCTATGGTT
AAGGCGCTTT CCGCTGATGG GAAAATCGCC GTTGGCTCTG CTGACTCTGA TATCAAAACC
CCTGTTAATG GGATGTACGC AGGAGGCGTC CTTACAGGAC CAAATAGTGT CCGCGCTATT
GCCTGGTCAG GCGACAATTG GGCAACAAAA ACTGACCTCG GCACGTTAAG AAGCGATAAC
CTAGGGGCCG CCGTTGCCAA TGCGATCTCC GCCGACGGGA AAGTGATCGG TGGGGCTTCT
CACCATTACG TCACCACTGA ATACTACCGC TCGAATGATG ATCAGCTAGC AACCATCTGG
TCAGGTGGCA ACTGGGCAAC AAAAACGAAC TTAGGATCAC TCAGAAGCGA TAACTCAGGT
GCATCTTTGG TGGCAGCACT CTCTGCCGAT GGCAGCATCG CAGGTGGAGC CGCTCTAAAC
GACGCTAATG CCACGCGAGC CATCATCTGG TCAGGCAGAC ACTGGGCAAC AAAAACAGAT
TTAGGAACAC TCAAAAGCGA TAACTCTGGA AATTCCGAGG TGGCAGCACT CTCCCCTGAT
GGCAGCGTCG CCGTAGGAAC TGCTGCTGCT GATTCAGGCA GCTCACATGC CACCGTCTGG
AAAATCACCT ATCCAGCAGA ATCAACAAGT ACATCAGACA GTACCACTAA CACCCCAACG
CCATCACAAC CATCTGTCGT CACGGTTGAT GCAGACAACA CGAAAAAAAC TTTATCGCGG
TTAGGTGCAG AAACCTTCTC GGTGATGGAC TTACAACGTC AAGGACTGAC CCGCCTGCAA
CAACACTGTC AGATAGACGC GGCGGGGCAA TCCTGCTGGG CTGTACAGAC TGCGATCAGC
TCCATAGACG GCAACAGAGA CAAAGTCGCC GGTATCAAGC TGGGCCATGG GTTCACCGAA
ACATTTTCTG TCGGCCTCTC CCTGGATCGC TCCCTGTCCC GCTCCCTGCC GGATAGTTAT
CTGAAAAATA ACGGCAATCT GGGTGCAGGC CTGTATGCAC AATGGAATAC CGCTTTTCAT
GGAAGCCAAT GGTATGTGCG TCCGGCCGTG GCATTTAATC GCTACAACGT CACCGTGCAA
CGTCCAGTCC TTGAAAATAC AGAGGCGGGA ATCGGCACCA GTCGTATGAA GGGCCGTGGC
GCTTCGCTGG AAACAGGACA AACCTTTAAG TCCGATCATG GCGTTTTGTT GGGCTGGCAT
CTAGGAGGAC GTTACAACAA CGTTTCCCGT GCTGAATACA GCGAACAAAA TGCTGCGTTC
CCAACCACTT ACGGCAAGGC GAGCTTCAAA CGCACTTCTG CTTATCTTGG TGCAGACGCA
ACCATCCCAT TAACCACGAA CCTAAAATGG ATGGCTGCTG CTGAAATAGA CAGGGCACTG
AAAAACCGTG ATGCCGTGTA CAGCGCACAA GCCGATTATA TTGGCAGCTT TAACCATCGT
GCCGGAATCA AAGGCACCAT TGCGACACTA TCAAGCGGAT TGCAATACAC CATCAGTGAA
AAAATATTGC TTGGATTAAC GCTGGATGTG AATCAAACCG CCTTTGGCGA TATCGCACGT
GGCGGAACGT TCACTGTAGG CGGACATTTC TAA
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| Protein sequence | MERKNHKKTT LATLISVLLM GGAGATYANS ASISEKLDLA TQHLDGAAST GEAISSDGKT
IATSINNRTR AFLLSGDNWA TKTELGSLKS DSSGTSIVRA LSADGKIAAG ISSVDSSSTQ
LHATIWSGDN WATKTTLGTL ATNNGGDSVV YALSADGKVA AGQTAASTGT LHAVIWSGDN
WATKTDLGTI RSDGAGDSMV KALSADGKIA VGSADSDIKT PVNGMYAGGV LTGPNSVRAI
AWSGDNWATK TDLGTLRSDN LGAAVANAIS ADGKVIGGAS HHYVTTEYYR SNDDQLATIW
SGGNWATKTN LGSLRSDNSG ASLVAALSAD GSIAGGAALN DANATRAIIW SGRHWATKTD
LGTLKSDNSG NSEVAALSPD GSVAVGTAAA DSGSSHATVW KITYPAESTS TSDSTTNTPT
PSQPSVVTVD ADNTKKTLSR LGAETFSVMD LQRQGLTRLQ QHCQIDAAGQ SCWAVQTAIS
SIDGNRDKVA GIKLGHGFTE TFSVGLSLDR SLSRSLPDSY LKNNGNLGAG LYAQWNTAFH
GSQWYVRPAV AFNRYNVTVQ RPVLENTEAG IGTSRMKGRG ASLETGQTFK SDHGVLLGWH
LGGRYNNVSR AEYSEQNAAF PTTYGKASFK RTSAYLGADA TIPLTTNLKW MAAAEIDRAL
KNRDAVYSAQ ADYIGSFNHR AGIKGTIATL SSGLQYTISE KILLGLTLDV NQTAFGDIAR
GGTFTVGGHF
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