| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0487 |
|---|
| Symbol | |
|---|
| ID | 6120890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 542312 |
|---|
| End bp | 543859 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641648556 |
|---|
| Product | F0F1 ATP synthase subunit alpha |
|---|
| Protein accession | YP_001775126 |
|---|
| Protein GI | 170729693 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.495216 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCA CCCTCAACCC TTCCGAAATA AGCGAATTGA TTAAGACTCG CATCGAACAG
GTCAAACTAT CCGCAGAATC CCGTAACGAA GGCACCGTGA CCAGCGTTTC CGATGGCATT
GTGCGCATTT TTGGCTTAGC AGATGCGATG CAAGGAGAAA TGATCGAATT GCCTAACAAA
ACCTATGCAC TAGCACTGAA TTTGGAGCGT GATTCAGTTG GTGCCGTGAT ACTGGGTGAT
TACAAACATT TACGTGAAGG AGACGTCGCT AAAACAACCG GACGCATCCT TGAAGTGCCG
GTTGGCAAAT CGCTGTTGGG CCGCGTTGTC AATGCTTTAG GTGAACCAAT CGATGGCAAA
GGTACACTAG GCCCCACTCA AACTGCACCA GTGGAGCGCG TTGCTCCTGG TGTCATCTGG
CGCAAATCAG TCGATCAACC AGTACAGACC GGTTATAAGT CAGTTGATGC GATGATCCCT
ATCGGCCGCG GCCAACGCGA ACTCATCATC GGAGACCGCC AAACTGGGAA AACCGCAATG
GCAATCGATA CAGTGATCAG CCAGAAAGAC ACCGGTATCA AATGCGTTTA TGTAGCGATC
GGCCAAAAAG CTTCTACTAT CGCCAATATC GTTCGAAAAC TCGAAGAGAA TGATGCGCTG
GACCACACTA TCGTCGTAGC CGCAACCGCA TCTGAATCAG CCGCACTTCA GTACATCAGT
GCCTACGCTG GGTGCACCAT GGGCGAATAT TTCATGGACC GTGGCGAGGA CGCACTCATC
ATCTATGACG ATTTGTCGAA ACAAGCCGTT GCCTATCGCC AAATCTCGCT ACTCCTAAAA
CGTCCCCCTG GCCGAGAAGC TTACCCGGGC GACGTATTCT ACCTGCACTC GCGTCTGCTG
GAGCGTGCCG CTCGTGTATC TGAAGAATAT GTCGAAAAAT TCACCCAAGG TGAGGTGAAA
GGAAAAACAG GATCCTTAAC TGCACTACCA ATCATCGAAA CACAAGCTGG CGACGTGTCC
GCCTTTGTAC CAACCAACGT AATTTCAATT ACTGATGGCC AGATCTTCCT GGAAACTGAT
CTTTTCAATG CTGGTATACG TCCAGCTGTC AACGCCGGCA TCTCCGTATC GCGCGTCGGT
GGCTCGGCAC AGACTAAAAT TATCAAGAAA CTGTCCGGGG GCATCCGCAT CTCACTGGCA
CAATACCGTG AGCTGGCAGC ATTCGCGCAG TTTGCATCTG ACCTAGATGA AACAACCCGC
AAGCAACTCG AGCGCGGCCA ACGTGTCACT GAACTGATGA AGCAGAAACA GTACACCTCA
ATGTCCGTCG CCAACCAAGC GTTATCAATC TACGCAGTCA ACGAAGGCTA CCTTGACGAC
ATACCAGTGG ACAAAGTACT CACCTTCGAA GAAGGCCTAC ACGCCCATTT TTCCAACACT
CAAGGCGCGC TGATCGACAA GATCAATAAC TCCGGTGACT GGGACAACAA CATTGAAGCT
GCTTTCAAGC AGCACATTGA AGAATTTAAG ACCACGGGCA GCTGGTAA
|
|---|
| Protein sequence | MATTLNPSEI SELIKTRIEQ VKLSAESRNE GTVTSVSDGI VRIFGLADAM QGEMIELPNK
TYALALNLER DSVGAVILGD YKHLREGDVA KTTGRILEVP VGKSLLGRVV NALGEPIDGK
GTLGPTQTAP VERVAPGVIW RKSVDQPVQT GYKSVDAMIP IGRGQRELII GDRQTGKTAM
AIDTVISQKD TGIKCVYVAI GQKASTIANI VRKLEENDAL DHTIVVAATA SESAALQYIS
AYAGCTMGEY FMDRGEDALI IYDDLSKQAV AYRQISLLLK RPPGREAYPG DVFYLHSRLL
ERAARVSEEY VEKFTQGEVK GKTGSLTALP IIETQAGDVS AFVPTNVISI TDGQIFLETD
LFNAGIRPAV NAGISVSRVG GSAQTKIIKK LSGGIRISLA QYRELAAFAQ FASDLDETTR
KQLERGQRVT ELMKQKQYTS MSVANQALSI YAVNEGYLDD IPVDKVLTFE EGLHAHFSNT
QGALIDKINN SGDWDNNIEA AFKQHIEEFK TTGSW
|
|---|
| |