| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0374 |
|---|
| Symbol | |
|---|
| ID | 6119585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 432445 |
|---|
| End bp | 433947 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641648447 |
|---|
| Product | glucose-6-phosphate 1-dehydrogenase |
|---|
| Protein accession | YP_001775018 |
|---|
| Protein GI | 170729585 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0364] Glucose-6-phosphate 1-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00871] glucose-6-phosphate 1-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCTCA CGCAAACAAA AACACCCCCA CACCAACCAA CGTTAACATC CGAATCCGAG
ACCAGGTCCA TGCACAACAC CCTCTTATTG TTTGGCGCCA CCGGCGACCT CGCCCAACGC
TATCTCTTCC CCTCCTTACT GCAACTGTTT ACTGATGGCT TATTGCCACA AGACTTCCGC
ATTCGTGCTC TGGCCTTGTC GCCCCATAAC ACCACACAAT TCCGCGACAT CCTGCGCCCG
CGCTTGGAAC AAGCACTACC CATCGCCAAC ACTGCGCACA TCCAAGCCCT ACTACAACGT
GTCGACTACC TTTCCGTAGA CTTGAACGAC CCAACATCAA TCGCCGAAGC AGTCCGAGAT
CTGACGGAAC ATCCCTGCAT CAGCTACTTG GCAATCCCAC CAGGCCTGTA CACCAACACC
GCCCTAGGAT TGGCACAGGG AGGGGCACTG CAGACACCAC ACCGATTGAT GCTGGAAAAA
CCGATCGGAC GCGACTCAAT AAACGCACGC GAAATCCTAA ACACCATCGG CACACTGATT
GACGAAGATC GCATCTTCCG CGTAGACCAC TATCTAGGCA AAGCAGCAGT GCAGAACCTC
GTCGCACTGC GCTTCGGAAA CACCCTGCTA GAAGCGGTAT GGAACCGAAA CCACATTGAG
TCAGTACACA TCCTCATCGC CGAAACCGAA GGCGTCGATG GCCGCAATGC TTACTACGCA
CGTGCTGGCG CACTACGCGA CATGATGCAA AGCCACATCC TGCAACTCCT ATGCCTGGTC
GCCATGGAAC CCCCGGCCTC TCTGGAAGCC GACCGCATAC GCGACGAAAA AGTCAAAGTC
CTGCGCGCAC TACGCCCACT GAACGCCCAA AACGCCGCAA TGCACAGCGT GCGCGGACGC
TACAGCGCGG GCACCATTAA CAGCCAACCA GTGCCAGCCT ATCAACCACC GGAAGGCAGC
AATGTAGAGA CCTTTGTCGG TGTCACTGCA TACATCGACA ACTGGCGCTG GGCGGGCGTA
CCGTTCCATC TATGCACAGG AAAACGCTTG GCCGAACGCT CAACCCAGAT CGTCGTCACC
CTCAAACCCG TCACACACTG GCTATTTGAA CGTCCAGACC GGAACAATGC AGCACCAAAC
CGCCTGTGCT TCAAACTACA GCCCCAAGAA AATATCGAAC TAAACCTGAT GAGCAGCCTG
GCCGGCCCCG AATGGGGAAC CCTAGAACTG CAACCGCTGG AATTGGAGTT ATCCGTCCCG
ACCGGAAAAC ATCGCCACAT CGCCTATGAG CGCCTGTTCC TCGACGCATT CAACGGCAAC
CCGGCGCTAT TTGTACGTCA CGACGAAGTC ACAGCCGCCT GGGCTTGGAT CGACAGCGTC
AGCAATGCCT GGGAACTGTC CGACTTACCA CTGCAACCCT ACCCCGCCGG CGGCTGGGGC
CCACCTCAAG CCCACCAATT TCTGCCGCCA TTGGGGATTG ATGGCCATGG AAACAACGCA
TGA
|
|---|
| Protein sequence | MLLTQTKTPP HQPTLTSESE TRSMHNTLLL FGATGDLAQR YLFPSLLQLF TDGLLPQDFR
IRALALSPHN TTQFRDILRP RLEQALPIAN TAHIQALLQR VDYLSVDLND PTSIAEAVRD
LTEHPCISYL AIPPGLYTNT ALGLAQGGAL QTPHRLMLEK PIGRDSINAR EILNTIGTLI
DEDRIFRVDH YLGKAAVQNL VALRFGNTLL EAVWNRNHIE SVHILIAETE GVDGRNAYYA
RAGALRDMMQ SHILQLLCLV AMEPPASLEA DRIRDEKVKV LRALRPLNAQ NAAMHSVRGR
YSAGTINSQP VPAYQPPEGS NVETFVGVTA YIDNWRWAGV PFHLCTGKRL AERSTQIVVT
LKPVTHWLFE RPDRNNAAPN RLCFKLQPQE NIELNLMSSL AGPEWGTLEL QPLELELSVP
TGKHRHIAYE RLFLDAFNGN PALFVRHDEV TAAWAWIDSV SNAWELSDLP LQPYPAGGWG
PPQAHQFLPP LGIDGHGNNA
|
|---|
| |