Gene Xfasm12_0224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0224 
Symbol 
ID6119726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp263143 
End bp264204 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content56% 
IMG OID641648305 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_001774881 
Protein GI170729448 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.724621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTGG CAACGTGGCT CGTGACCGGT GGTGCCGGTT TCATCGGCGG TAATTTTGTA 
TTGCAAGCGA TTAGCCTCGG GCATCGTGTG ATTAATCTTG ATGCTCTGAC GTATGCGGGT
CATTTGGAGA CGCTCGCTGC GCTTGATGGG TGCGCGGAGC ATCTTTTTGT TCATGGTGAT
ATTGGCGATC GTGCGTTGGT GAGCTGTTTG CTGGATACAC ATCGCCCGGA TGCAGTGCTG
AATTTTGCTG CTGAGAGTCA CGTTGATCGT TCGATTGATG CTCCTGCTGC GTTCATTCAG
ACCAATGTCG TTGGGGCGTT GCTGTTATTG GAGGCGGTGT GTGGGTACTG GAAGGCGTTG
CCGGAGGCGG CGCGTGCTAC GTTCCGTTTT CTGCATGTAT CCACCGATGA GGTTTACGGC
AGTTTGGGGG AGACGGGCGC ATTTACAGAG AGGACGGCGT ATGCGCCTAA TTCGCCTTAT
TCGGCGTCAA AGGCCGCGTC TGATCATTTG GTCCGTGCGT TTCACCATAC GTACGGATTG
CCGGTGCTGA CCACGCATTG TTCAAATAAC TATGGCCCAT ATCATTTTCC GGAGAAGCTG
ATTCCGCTGG TCATCACCAA GGCGTTGGCG GGTGAGCCGT TGCCTGTGTA TGGCGATGGG
CGGCACGTGC GTGATTGGCT GTTTGTCGGC GATCACTGTA CCGCGCTGTG TGCTGTATTG
GCTGGAGGGC GGGTGGGTGA AACGTACAAT ATCGGGGGGC AGGCCGAGCG TGAGAATCTT
GAAGTGGTCC GCATGATTTG CTGTTTGCTT GATGAGCGCC GCCCGCGTGC CGATGGGCTG
AGTTATCAAA GCCAGATTGT TCATGTTGCA GATCGTCCGG GGCATGATCG CCGTTATGCG
ATCGACACGT CCAAGTTGGT GAATCAGTTA GGCTGGGCGC CGGTGTATCG CTTTGAGCAG
GGACTTGCGC TGACTGTGGA TTGGTATTTG CAGCATCAGG ATTGGGTACG TGCGGTGCTC
CAAGGGCGTG ACCGCGTTGA GGGCCTACTG ACTGCGGTGT AA
 
Protein sequence
MGLATWLVTG GAGFIGGNFV LQAISLGHRV INLDALTYAG HLETLAALDG CAEHLFVHGD 
IGDRALVSCL LDTHRPDAVL NFAAESHVDR SIDAPAAFIQ TNVVGALLLL EAVCGYWKAL
PEAARATFRF LHVSTDEVYG SLGETGAFTE RTAYAPNSPY SASKAASDHL VRAFHHTYGL
PVLTTHCSNN YGPYHFPEKL IPLVITKALA GEPLPVYGDG RHVRDWLFVG DHCTALCAVL
AGGRVGETYN IGGQAERENL EVVRMICCLL DERRPRADGL SYQSQIVHVA DRPGHDRRYA
IDTSKLVNQL GWAPVYRFEQ GLALTVDWYL QHQDWVRAVL QGRDRVEGLL TAV