| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0194 |
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| Symbol | secF |
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| ID | 6121184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 232416 |
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| End bp | 233381 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641648279 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001774857 |
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| Protein GI | 170729424 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTAT TCCCGTTGCA TCTCATTCCG AACGACACCA AGATCGACTT CATGCGCTGG
CGTAAACCGA CGTTGAGTTT GATGTCGATA CTTTTTGCAA TAGCAGTCTT GGTTGTCGTT
TTTAAGGGAT TTAACTATGC GCTGGAATTT ACCGGCGGCA CGCTAGTGCG TACTCAGTTC
GCCAAGCCTG TGGATGCCGA TCAGGTGCGT CAGCGGCTGG AGGTTGGTGG TTTAGGGAAT
GCACAGGTAC AGAGCGTCGG GGGTGGCAAC GAGTTGCTGA TCCGTTTGCA GCCGTATGGC
GAGCATAATA ACGATGATGT TGCCAAAAAC GCTGCCGAAG CTGTGCGCAA GGTGATTACG
TTGCCGGATA ATCCGGCAAC TGTACAGCCT GGGGAATTCG TTGGTCCACA GGTGGGCAAA
GATCTCGCGA TGAATGGTGT ATACGCAACG ATCTTTATGC TGTTGGGTTT TTTGATTTAT
ATCGGGTTTC GGTTTGAGTG GAAGTTTGCG GTTGCAGCGA GTCTAACGGC GTTCTTCGAT
CTGATTTTGA CGATCGCTTA TATGTCGCTG CTTGGTCGGG AGTTCGACTT GACTGTTCTG
GCTGGCTTGT TGTCTGTGAT GGGTTTTGCG ATCAATGACA TCATTGTTGT GTTTGACCGT
GTGCGTGAGA ACTTCCGTAG CCTGCGTGTG GAGCCGTTAG AGGTGTTGAA TCGTTCGATC
AATCAGACGC TATCTCGTAC GGTGATTACG GCGGTCATGT TCTTTCTGTC GGCGTTTGCG
TTGTACTTGT ACGGCGGCCG CTCGATGGAG GGGTTGGCTG AAACCCATAT GGCTGGTGCG
GTGATTGTGG TGGTGTCTTC AGTGGTTATG GCGGTGCCAT TGTTAACCAT TGGCCCTTTA
AAGGTCAGTA AGCAAGATTT GCTGCCGAAG GCGAAAGACC TGGAGTCATT GGAGCGCCGT
CCTTAA
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| Protein sequence | MKLFPLHLIP NDTKIDFMRW RKPTLSLMSI LFAIAVLVVV FKGFNYALEF TGGTLVRTQF
AKPVDADQVR QRLEVGGLGN AQVQSVGGGN ELLIRLQPYG EHNNDDVAKN AAEAVRKVIT
LPDNPATVQP GEFVGPQVGK DLAMNGVYAT IFMLLGFLIY IGFRFEWKFA VAASLTAFFD
LILTIAYMSL LGREFDLTVL AGLLSVMGFA INDIIVVFDR VRENFRSLRV EPLEVLNRSI
NQTLSRTVIT AVMFFLSAFA LYLYGGRSME GLAETHMAGA VIVVVSSVVM AVPLLTIGPL
KVSKQDLLPK AKDLESLERR P
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