Gene Xfasm12_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0154 
Symbol 
ID6121144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp189486 
End bp189881 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content49% 
IMG OID641648242 
Productglycine cleavage system protein H 
Protein accessionYP_001774821 
Protein GI170729388 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID[TIGR00527] glycine cleavage system H protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.326161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATA TCCCTGGCGA CCTCAAGTTC CTCAAATCCC ACGAATGGGT CCGGATCGAA 
GACAACAATC GTGCCATCGT TGGCATTTCC GACCATGCAC AAAATCTGCT CGGTGATCTG
GTGTATGTCG AATTACCCAA TATTGGCGAT CACCTGGACG CTGGCGCTAC CGCTGCAGTC
ATTGAGTCGG TCAAGGCAGC CTCAGATATC TACAGCCCAG TTACCGGAAA AGTGATTGAA
GTCAATACTA CGTTAAGCGA CAAACCTGAG ACGATCAATG AAGATCCCTA CGGTGAAGGT
TGGATTATGG TCATTGAGAT GCAAGCCCCT GAGGAAATCA GTGATCTACT TTCTCCCGAT
GATTACACCG AAGTGCTGGA AAGTGACGAA CACTGA
 
Protein sequence
MSDIPGDLKF LKSHEWVRIE DNNRAIVGIS DHAQNLLGDL VYVELPNIGD HLDAGATAAV 
IESVKAASDI YSPVTGKVIE VNTTLSDKPE TINEDPYGEG WIMVIEMQAP EEISDLLSPD
DYTEVLESDE H