| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0147 |
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| Symbol | prfC |
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| ID | 6121137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 181102 |
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| End bp | 182706 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641648235 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001774814 |
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| Protein GI | 170729381 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAG TTGTTGCTGA AACAGCGCGC CGCCGTACCT TTGCCATTAT TTCCCACCCT
GATGCTGGGA AAACCACACT CACCGAGAAG TTATTGTTGT TTGGTGGTGC AATTCAGATG
GCTGGCTCGG TTAAAAGCCG AAAGGCCGTC CGACACGCTA CCTCTGACTG GATGACGTTG
GAAAAGGAGC GTGGTATCTC GGTTACGTCT TCAGTGATGC AGTTTCCGTA TGAGGGAAAG
ATTATTAATC TGCTCGACAC TCCAGGCCAT GCTGACTTTG GTGAGGACAC TTACCGTGTA
TTGACCGCAG TGGATTCAGC TTTGATGGTG ATTGATGTTG CTAAGGGTGT GGAGGAGCGG
ACTATTAAGT TGATGGAGGT ATGTCGGTTG CGTGATACCC CCATTATGAC TTTTATCAAT
AAGCTTGACC GCGAAGGTAA GAACCCAATT GAGCTGCTGG ATGAGGTTGA ACGCGTGCTC
GGTATCCAGT GTGCGCCGGT GACTTGGCCT ATTGGTATGG GGAAACGCTT GAGGGGTGTG
GTTAATTTAC TGACGAATGA GGTTCATCTG TACGAGCCTG GCCGTAATTT CACTCGCCAG
GACTCGACCA TTTTTACGTC GCTGGAAGCT CCCGGTTTAG CGGAACGTAT TGGTGAGCAA
ATGCTGGCTG ATTTGCATGA AGAATTGGAG CTTATTCAGG GTGCTAGTGC ATGTTTTGAT
CCAACAGAGT ATCTCGGGGG CCGCCAAACT CCAGTTTTCT TTGGATCTGG TGTGAATAAC
TTCGGTGTGC AGCCACTGCT GGATTTTTTC GTCGAACATG CACCTTCACC GCAACAGCGT
GATACTACCA GTCGCGTCGT ACTACCGACC GAAGAAAAAT TGACCGGATT TGTATTCAAA
ATCCAAGCCA ATATGGATCC GCAACACCGT GACCGCGTGG CGTTTATGCG GGTATGTTCC
GGACGTTTCA CCGCAGGCAT GAAGGCTTTT CACGTGCGTA GTAGTAAAGA TCTCAAGCTT
GCTAATGCAT TGACCTTCAT GGCTTCGGAT CGCGAGAGCG TTGCAGAAGC TTTCCCTGGT
GACGTGATTG GAATTCACAA CCACGGTAGG GTTTCAATTG GTGATACTTT CACCGAAGGG
GAGGTGCTGT CGTTTACTGG CATTCCGAGC TTTGCTCCTG AACTGTTTCG CCGTGCTTGT
TTGGGCGATC CGCTGAAGCT CAAACAACTT CAAAAAGGGC TGACGCAACT TTCAGAGGAA
GGAGCCACAC AGTTCTTTCG CCCGCTGATG AGCAACGATC TGATTTTGGG TGCAGTAGGG
ATGTTGCAGT TCGATGTGGT TGCCTATCGA CTTAAAAACG AGTACGGGGT GGATGCCACT
TTTGAACCAG TCAGCATTAC CACCGCGCGT TGGGTGTACT GCGATAACTC AAAGACGTTG
GAAGAATTTC GCGAAAAGAA CGTAACGAAT TTGGCTGTGG ACGCTTCAGG AGAGTTAGTT
TACTTGGCGC CGACTCGAGT CAACTTGCAG TTAGCACAGG AGCGTGCGCC AGAGATACAC
TTCTTCGCTA CGCGCGAGCA CGCCTACGCT GTAGGCGTCG ATTGA
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| Protein sequence | MSEVVAETAR RRTFAIISHP DAGKTTLTEK LLLFGGAIQM AGSVKSRKAV RHATSDWMTL
EKERGISVTS SVMQFPYEGK IINLLDTPGH ADFGEDTYRV LTAVDSALMV IDVAKGVEER
TIKLMEVCRL RDTPIMTFIN KLDREGKNPI ELLDEVERVL GIQCAPVTWP IGMGKRLRGV
VNLLTNEVHL YEPGRNFTRQ DSTIFTSLEA PGLAERIGEQ MLADLHEELE LIQGASACFD
PTEYLGGRQT PVFFGSGVNN FGVQPLLDFF VEHAPSPQQR DTTSRVVLPT EEKLTGFVFK
IQANMDPQHR DRVAFMRVCS GRFTAGMKAF HVRSSKDLKL ANALTFMASD RESVAEAFPG
DVIGIHNHGR VSIGDTFTEG EVLSFTGIPS FAPELFRRAC LGDPLKLKQL QKGLTQLSEE
GATQFFRPLM SNDLILGAVG MLQFDVVAYR LKNEYGVDAT FEPVSITTAR WVYCDNSKTL
EEFREKNVTN LAVDASGELV YLAPTRVNLQ LAQERAPEIH FFATREHAYA VGVD
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