Gene Xfasm12_0126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0126 
Symbol 
ID6119837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp149705 
End bp150934 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content56% 
IMG OID641648211 
Productbifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 
Protein accessionYP_001774795 
Protein GI170729362 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.534216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGGAT CTCATCAGCC ACGGTCATTG AACGGACAGC GTTTGCTGTT GTGTGTCAGT 
GGTGGTATTG CTGCTTATAA ATCGCTTGAG CTTGTGCGCT GCCTTTGTGG TGCGGGTGCT
CAGGTCCAGG TTGCGATGAC TGCTAGTGCG CAGCAGTTTG TCACGCCGCT TAGTTTCCAG
GCATTGTCTG GCCAATCGAC CCGTACCACG CTGTGGGATG GTAACGCTGA ACAGGCGATG
GGGCATATTG AGTTGGCGCG TTGGGCCGAG CGTGTTTTGA TTGCTCCTGC TAGCGCTGAT
GTGATCGCGC GGTTGGCGCA TGGTTTGGCG GATGATTTGG TGACGACTCT GTGTTTGGCG
ACAACGGCGC CGCTGATCAT ATGCCCAGCG ATGAACCACA ATATGTGGCT GCATCCAGCG
ACCCAGGCGA ATGTTGCGAT GTTGTTGGGG CGTGGTGTGC AGGTCATCGG ACCAGAGAAT
GGTCCGTTGG CAGAAGGTGT GTCTGGGTTG GGCCGTATGA GCGAACCAGA GGCGATTGTT
GTTGCGTTGG TTCAGGGGGT GTCTCCAGCT CCAGTTCACG GTGGTTTGTT CCATGGGCAG
CGCATTGTGA TTAGTGCTGG ACCCACATTC GAAGATTTGG ATCCGGTGCG TTACCTTGGC
AATCGCAGCA GTGGCAAGAT GGGTTTTGCT TTGGCTAGTG CGGCGGTGTC CCATGGGGCT
GAGGTGGTGT TGGTGGCTGG TCCGGTGTAT CAGCCAACTC CACCTGGGGT GACTCGGGTG
GATGTACGTT CGGCGGCACA GATGCGCGAT GCAGTCCTCA GCGCGTTCCC TGCGGATGTT
TACATCGGTG CAGCTGCGGT GGCCGATTAC GCACCTAAAT CGGTGTTGCC ACAAAAGATC
AAGAAGTCCG GCCAGACGCT GATCCTGGAG TTGGTGCGTA CCCAAGACAT TTTGTCAGAG
GTGGCAGCGC AGACGGCTAA CCTGAAATTT GTGGTTGGTT TCGCTGCAGA GACGCATGAT
GTTGCGTGCT ATGCACGCGG TAAATTGGCT GCCAAGCACT TGGATTTGAT TATCGCCAAC
CAGGTTGGCA TTGTTGGAAA CGGTTTTGAA AGTGATGACA ATGCTGTCAC TGCGTATTGG
CAGGGTGGCG AACGCGTTTT CGCTAGTTGC AGTAAGGTGG AGTTGGCTGA GCGCCTGCTG
GCACTGATTG CTGAAAGGAT GCAGACATGA
 
Protein sequence
MTGSHQPRSL NGQRLLLCVS GGIAAYKSLE LVRCLCGAGA QVQVAMTASA QQFVTPLSFQ 
ALSGQSTRTT LWDGNAEQAM GHIELARWAE RVLIAPASAD VIARLAHGLA DDLVTTLCLA
TTAPLIICPA MNHNMWLHPA TQANVAMLLG RGVQVIGPEN GPLAEGVSGL GRMSEPEAIV
VALVQGVSPA PVHGGLFHGQ RIVISAGPTF EDLDPVRYLG NRSSGKMGFA LASAAVSHGA
EVVLVAGPVY QPTPPGVTRV DVRSAAQMRD AVLSAFPADV YIGAAAVADY APKSVLPQKI
KKSGQTLILE LVRTQDILSE VAAQTANLKF VVGFAAETHD VACYARGKLA AKHLDLIIAN
QVGIVGNGFE SDDNAVTAYW QGGERVFASC SKVELAERLL ALIAERMQT