| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2017 |
|---|
| Symbol | rplT |
|---|
| ID | 6203373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 2259954 |
|---|
| End bp | 2260313 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641703528 |
|---|
| Product | 50S ribosomal protein L20 |
|---|
| Protein accession | YP_001830690 |
|---|
| Protein GI | 182682530 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0292] Ribosomal protein L20 |
|---|
| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGAG TTAAGCGTGG CGTGCAGGCG CGCCGCCGTC ATAAGAAAAT CCTAAGTCTA
GCGAAGGGTT ATTACAATGC TCGCCGCAAG GTGTTTCGTG TTGCCAAGCA GGCTGTTATC
AAAGCGCAGC AGTATGCTTA TATTGGCCGT AAACAGAAAA AGCGTAATTT CCGATCTCTA
TGGATCGTCC GTATTAATGC GGCGGCTCGT ATGAATGGGT TGAGTTACAG CCGTTTCATG
AATGGCATCT TGAAGTGTGG TATTACCTTG GACCGTAAGA TGCTTGCTGA TATTGCTGTG
CATGATCCTG CCGGTTTTAC TGCCCTTGCT GAAAAGGCGA AAACCATGCT TGCGGCATAA
|
|---|
| Protein sequence | MARVKRGVQA RRRHKKILSL AKGYYNARRK VFRVAKQAVI KAQQYAYIGR KQKKRNFRSL
WIVRINAAAR MNGLSYSRFM NGILKCGITL DRKMLADIAV HDPAGFTALA EKAKTMLAA
|
|---|
| |