| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1748 |
|---|
| Symbol | |
|---|
| ID | 6203582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 1937423 |
|---|
| End bp | 1938217 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641703258 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001830426 |
|---|
| Protein GI | 182682266 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.751418 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACTTC CAACACCCGC CGTCCAATTG TCCGGTGTCC GTATCGAACG CGGCGGACGC
ACTGTTTTAA GCAATGTTGC ATTGCAAGTG CCGCGCGGCA GTATTACCAC GGTGCTAGGC
CCATCCGGGA GTGGTAAATC GACCATGCTC GCAGCACTGA CAGGCGAGCT TCGGCCGACT
GAGGGGGAGG TCCGTCTGTT CGGAGATGGA ATCCCACAAG GAACCCAAGC ACTGTTAGAG
ATGCGGCGCA ACTTGGGGGT ATTACTCCAG GGTAACGGTT TACTGACCGA CCTGAGCGTC
GCTGAAAACG TGGCGTTGCC GCTACGCGCG CACACTCGGA TGCCAGAACC ACTGCTGCAA
CGGTTGGTCC TGATGAAGCT ACACGCAGTT GGCCTACGAG CCGCCGCCGA AGCGATGCCA
CGTGAGTTAT CAGGCGGAAT GGCACGGCGC GTAGCGCTGG CACGTGCGCT GGCTTTGGAT
CCACCACTGA TGATTTACGA CGAGCCCCTG ACAGGGTTGG ACCCGATTGC CAGTGGTGTG
ATCGTGAGTC TCATCAAGCG CCTTAATGAC AGTCTTGGCT TAACCACAAT CATCGTCAGC
CATCACGTAC ACGAGACGCT CCCCATTTGC GACCAAGCGG TCGTGATTGC TAATAGCACG
GTCATTTTTG CCGGCACGCC TGCGCAGCTG GAAGCCAGCA ACGATGCGCT GGTATACCAG
TTTATGCATG GGCAACCGGA CGGGCCGATC CCATTCGATG CAGCACCACG CACATCTGAA
CGGAGTTCCG CCTAA
|
|---|
| Protein sequence | MILPTPAVQL SGVRIERGGR TVLSNVALQV PRGSITTVLG PSGSGKSTML AALTGELRPT
EGEVRLFGDG IPQGTQALLE MRRNLGVLLQ GNGLLTDLSV AENVALPLRA HTRMPEPLLQ
RLVLMKLHAV GLRAAAEAMP RELSGGMARR VALARALALD PPLMIYDEPL TGLDPIASGV
IVSLIKRLND SLGLTTIIVS HHVHETLPIC DQAVVIANST VIFAGTPAQL EASNDALVYQ
FMHGQPDGPI PFDAAPRTSE RSSA
|
|---|
| |