Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1556 |
Symbol | |
ID | 6202638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 1729716 |
End bp | 1731146 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641703067 |
Product | RNA-binding S4 domain-containing protein |
Protein accession | YP_001830238 |
Protein GI | 182682078 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0137817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATA CCCCAAAACC ACCATCAAAC ACACTTTCAC TCAAACGCGA GACAGCCACA GAAGCACCAA AACTGGAAGA GCGCCTGCAT AAAGTGCTTG CCCAAGCGGG TCTAGGTTCC CGCCGTGCCC TGGAACAACG CATCTCCAAC GGACTCATCA AAGTCAATGG AGACATTGCG CAGCTCGGCA TGTCCGTTAA AAGTGGCGAC AAAATCGAAC TGGACGGCCG CAGCTTCGTC GCCAGCGCCC TCACTGAACC GGCGCGCGTA CTGATCTACA ACAAACCAGA AGGCGAAGTG ACCACACGCG AAGACCCAGA GGGTCGCCCC ACTGTGTTCG AAACACTCCC CGTCCTCAAA GGCGCACGTT GGATCGCCAT CGGCCGCCTG GATATCAACA CCACTGGCTT ATTACTGCTC ACCACAGACG GCGAACTTGC CAATGCAATG ATGCACCCCT CATCGGAAAT AGAACGCGAA TATGTCGTAC GTGTACGCTC CCCCGAAGGA GAAGAACATG TGCAGGATGA GCTACTCGAG CAACTTACGC GCGGCGTCAT GCTGGAAGAC GGCACCGCAA AATTCGACAC GATTGAACGC ATCGGCAACA CCGACTCACA CGACTGGTTT CGTGTCGTCG TCAAAGAAGG CCGCAACCGC GAAGTACGTC GGCTATGGGA ATCGCAAGGC TGCCAAGTCA GCCGCCTCAA ACGTACACGT TATGGTTCCG TCCTCCTACC ACGCGAACTA CTGCGTGGCC AATCGACCGA ACTACCCAAG ACCCAAGTAG AAGCACTACG CACCCAACTG AAACTAGAAA AAGACATGCC GTTAGCACTC ACCCTGCAAC CGGTTATCGG CCAACGCCGT TCAGCCAAAG CCACGCTGCA CGTGAATCGC AACGACAACA ACAAACACGC CTACCACAAC AACCACAGCA CCGCCGATGA AAGTCGCGAA CTGCGTCGCT TTGACACCCT GCGTGATGAC CGAGGTCGCG GCCAAGGCAA GCACCACTTC AAAGATAGAC TGACTGTCAG TGGTGAAGCT GCCGCAAAAC AAGCACACAA ACCCTTCAAA CAATACAAAC CCAAGAACGA CCGTTCGCTA TCGGAAGGCA GCCCGGCAAC ATTCCAGAGC TGGTACGTCC CTGAAGGCGT CAGCACCGGC CCCCGCAACC ACCGCAATGC TGGTGCTGGC AATGGTGCCC ACCCCAACAA AAAAAGCCCA AACCCAAACA CCCGTAACAC ACAGGGACAA CAAACACGCA AGTCTCCATA CAAATACACG AACAATGCAC CCAACTTCCC CTCCGACCAC GCCACGCCAA CCTTCAACCC CTATGGCAAC CCTGGTCAGA AAACAGGAGC AGGCCAACCA AACAACAGCG GTGGCAAATA CAACCGGAAT CGGGGACCAA GATACCCATA A
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Protein sequence | MSDTPKPPSN TLSLKRETAT EAPKLEERLH KVLAQAGLGS RRALEQRISN GLIKVNGDIA QLGMSVKSGD KIELDGRSFV ASALTEPARV LIYNKPEGEV TTREDPEGRP TVFETLPVLK GARWIAIGRL DINTTGLLLL TTDGELANAM MHPSSEIERE YVVRVRSPEG EEHVQDELLE QLTRGVMLED GTAKFDTIER IGNTDSHDWF RVVVKEGRNR EVRRLWESQG CQVSRLKRTR YGSVLLPREL LRGQSTELPK TQVEALRTQL KLEKDMPLAL TLQPVIGQRR SAKATLHVNR NDNNKHAYHN NHSTADESRE LRRFDTLRDD RGRGQGKHHF KDRLTVSGEA AAKQAHKPFK QYKPKNDRSL SEGSPATFQS WYVPEGVSTG PRNHRNAGAG NGAHPNKKSP NPNTRNTQGQ QTRKSPYKYT NNAPNFPSDH ATPTFNPYGN PGQKTGAGQP NNSGGKYNRN RGPRYP
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