Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1488 |
Symbol | |
ID | 6203588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 1644006 |
End bp | 1645241 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641703001 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001830173 |
Protein GI | 182682013 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATATT TTTTAAAAAT CTCCCTGCTT GCCGCAGCAC TCATGACCAC GTCATGCAGC CAAGGCGACA AGAATAGTGC ACATCCTGCT GGCGCTGACA ACACACAAAG CGTTGAGAAA CAGGGGGATA ACGCTCCAAT TCCTGTCACA GTAGTCGCAG CAAGCAGCCA AAATGTTCCT GTGTACGCTG CCGCCCCAGG CACAGTGGCC GCAATGAATA CCGTCACGAT TAACCCGCAG GTCAGTGGTC AATTGATCAG CCTACACTTC CGCGAGGGTG AATCAGTAAA AAAAGGCCAA TTACTCGCCG AAATTGACGC ACGCGCACTT CAGGCCAGCT ACGATCAAGC CGCAGCGGCG AAGCGTCAGA ACCAAGCACT GCTGGCAACC GCACGTGCCA ACTACACCCG CTCCAGCACG TTGGAATACC AACCGTACGT CGCCAAGACA GAATTAGATA CACAACATAA CCAGGTCACG CAGTATGAAG CGGCAGTCGC AGCAAACGAA GCCGCAATGC GAGCAGCCCA AGTACAGCTG CAATACACTA AGATTGTCGC ACCGATCGAC GGCGTCGCCG GGATCCGCAG CGTAGATGCT GGGAACGTGG TCACAACTAG CACCTCCATC GTGACACTGA CACAGATGCA TCCAATCTAC GTCTCATTCA ATCTTCCCGA GCGCTTGTTG CAGGAAGTAC GCCAAGCCCA TGCCTCCGGC CCCGTGATGG TGGCCGCGCT GGACCGCGGA GATGCACACC CACTGACCGA AGATGGCACA TTGGATGCGA TCAATAACCA AATAAACACT GATAGCGGCA CTTTCAGCGC ACGTGCCGTG TTCTCCAACC GCAATAACGC ACTATGGCCT GGCCAGTTCG TCAACGCGCG TCTGCAACTA CGTACGATTG CCAATGGTGT CGTGATTCCG GCGCAAGCAG TGCAACGCGG CCCCAATGGC GACTACGTTT ACCTTGTCAA GCAAGATCAC ACGGTCGTTA CTCAGGAAGT CACCCAAGGT GTGGAAATCG GTGACAGCCA TGTACAAATC GCCAAAGGCT TGAATGTCGG CGACACAGTA GTCACAGAAG GTCAATTCCG GCTCAAACCA GGCAGTAAAG TCATCGCGCT AGCACCAGGT GAAACTCCAC CAGCACCAAC CGAAGCCGAA TTGAAGGCTG CTGCGGAAAA ACGCAGCAAA AATAGCATGG GTGGTCCTCC TCGCGGCGGC CCATAA
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Protein sequence | MPYFLKISLL AAALMTTSCS QGDKNSAHPA GADNTQSVEK QGDNAPIPVT VVAASSQNVP VYAAAPGTVA AMNTVTINPQ VSGQLISLHF REGESVKKGQ LLAEIDARAL QASYDQAAAA KRQNQALLAT ARANYTRSST LEYQPYVAKT ELDTQHNQVT QYEAAVAANE AAMRAAQVQL QYTKIVAPID GVAGIRSVDA GNVVTTSTSI VTLTQMHPIY VSFNLPERLL QEVRQAHASG PVMVAALDRG DAHPLTEDGT LDAINNQINT DSGTFSARAV FSNRNNALWP GQFVNARLQL RTIANGVVIP AQAVQRGPNG DYVYLVKQDH TVVTQEVTQG VEIGDSHVQI AKGLNVGDTV VTEGQFRLKP GSKVIALAPG ETPPAPTEAE LKAAAEKRSK NSMGGPPRGG P
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