Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1481 |
Symbol | |
ID | 6202490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 1633701 |
End bp | 1635104 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641702994 |
Product | lipopolysaccharide biosynthesis protein |
Protein accession | YP_001830166 |
Protein GI | 182682006 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.160765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTATC CCAATCAAAC TTCTTCCGCT TTGTTTCACT CCTCAGAACC ATTGGGTCTG AATCTTGTTG ATTATTTACG TGTATTGCTC AGTCAATATT GGCTGATTAT TGGTATTGCT ATTGGCGCAA CTTCGCTAAC TTTTGGTGTC TCGTTGCTGC TTCCTCAAAA GTTTCGTGCC ACTGCAACGT TACAGATTGA GCGCGATGTG CCTAAGGTGA TGAATGTCGA TAATCTGATC CCTGTAGAGT CGCCGCTTGA TCGTGATTTT TATCAAACTC AATATCAGTT ATTACAGAGT CGTTCGTTAG CGCGTGCAGT CATTCGTAAG ATGAACTTGG GTCGAGAGCC AATGTTCAAA CCACTCGTTG ATAAGGTATT GTCAAAGGTA CAGAGTCTTC CAGTTAATAC TCGTAACACG GCTATCGAGA GTGCATTGAT AGAAATGATG TTGAACAGTT TAAAGATCGA ACCAATCCTC AATTCGAGGC TGGTCTATGT GCATTTTGAT TCTCATGATC CCACCTTATC GGCGAAGGTT GCTAATGCCT ACGCCAAGAT GTTCATTGAA AATAATCAGC AGCGTCGTTC AAATGCTTTC TCATTTGCAA TGAAGTATCT TGCTGGACGC TTGGAACAGT TGCGTATCAA GGTGGATAAG TCAGAAAGGA ATGTGGTTGC GTATTCAACT GATGAAAAGA TTGTTTCTGT CGGTGACGAA AAACCATCAC TCTCTGCACA AAACCTGAGT GATCTTAATG CGTTGCTGGC CTCCGCACAA AATGAGCGGA TTAGGGCCGA AGCCTCTTGG CGTCAGGCCA GTATTGGCGA TGGTCTGAGT ATCCCTCAAG TGTTGTCTAA CCTGTTGGTA CAGTCTTTGC GTACCGACCA GGCGAATATG GTCAATGAAT ATCAGCAGAA ATTATCCATG TTCAAACCGG AGTATCCGGA GATGCAACGG TTGAAAGCAA GAATCAAAGA AAATACTAAG CAAATTAATG CCGAGGTATT CAATATTAGG CAATCGTTGA AGGCCCAGTA TGAAGCTGCA TTACGTCAGG AAAATCTATT GAATGACCGT ATTGCAGTGT TGGAGAAGGA TGAGTTGGAT CTGAAAACGC GTCTTATTCG TTACAACCTA CTCGAGCGTG AGGCTGAAAC AGATCGCCAA CTTTATGATG CGTTGTTGCA ACGTTATAAG GAAATTAGTG TGCTTGGCGA TGTTGGTAGT AACAATGTGA CGGTAGTGGA TGCTGCAGAC ATTCCGAGCC GCCCGATTTC GCCGAATTTG TTAATGAACA CGATATTGGG TGGAATTTTT GGTGTCTTTT TAGGTTTGAC AGTTGCTATG GTGCGTTATT CCATGCATGG AGCGAAGCGG ATAAACGTGA TGAGTGTTGA ATAA
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Protein sequence | MDYPNQTSSA LFHSSEPLGL NLVDYLRVLL SQYWLIIGIA IGATSLTFGV SLLLPQKFRA TATLQIERDV PKVMNVDNLI PVESPLDRDF YQTQYQLLQS RSLARAVIRK MNLGREPMFK PLVDKVLSKV QSLPVNTRNT AIESALIEMM LNSLKIEPIL NSRLVYVHFD SHDPTLSAKV ANAYAKMFIE NNQQRRSNAF SFAMKYLAGR LEQLRIKVDK SERNVVAYST DEKIVSVGDE KPSLSAQNLS DLNALLASAQ NERIRAEASW RQASIGDGLS IPQVLSNLLV QSLRTDQANM VNEYQQKLSM FKPEYPEMQR LKARIKENTK QINAEVFNIR QSLKAQYEAA LRQENLLNDR IAVLEKDELD LKTRLIRYNL LEREAETDRQ LYDALLQRYK EISVLGDVGS NNVTVVDAAD IPSRPISPNL LMNTILGGIF GVFLGLTVAM VRYSMHGAKR INVMSVE
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