| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1441 |
|---|
| Symbol | |
|---|
| ID | 6202334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 1591062 |
|---|
| End bp | 1592390 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641702954 |
|---|
| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| Protein accession | YP_001830126 |
|---|
| Protein GI | 182681966 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATA GAACGCATTA CTATTGGATC GCACACCAGG GTACCCCACT GCATGGCGTC
CTGAGTATCC CCGGCGATAA ATCAATCTCT CATCGTGCAG TCATGTTTGC TGCCCTTGCG
GATGGCACGT CACGTATTGA TGGCTTTCTT GAGGCGGAGG ATACGCGCTC TACAGCAGCG
ATCTTGGCCC GATTGGGTGT GCGTATCGAA ACTCCCTCAT TCACGCAGCG CATCGTCCAT
GGTGTTGGTG TGGATGGACT CCAGGCATCG GATATTGCCC TGGATTGTGG CAATGCAGGC
ACTGGCATGC GCCTGCTCGC TGGTTTGCTG GTAGCGCAGC CTTTTGACAG CGTTTTAGTC
GGAGATGCAT CACTGTCCAA GCGACCGATG CGACGTGTGA CGGATCCGCT GTCACAGATG
GGCGCACGTA TCGATACCAG CGACGATGGT ACTCCACCGC TGCGTATTTA CGGTGGTCAA
TTACTCCGCG GTATCGATTT TATCTCCCCA GTGGCCAGTG CTCAGATCAA GTCAGCGGTG
TTGCTGGCTG GATTGTATGC ACGTAACGAA ACGGTAGTGC GTGAACCGCA CCCGACGCGT
GATTACACCG AGCGTATGCT CACTGCGTTT GGTGTGGACA TTGATGTTTC CACAGGGTGC
GTGCGGTTGC GTGGTGGGCA ACGGTTATGT GCTACCAATA TTACAATCCC GGCTGATTTT
TCCTCAGCTG CGTTTTATCT GGTTGCAGCC AGCGTGATTC CTGGCTCTGA TATCACCCTG
CGTGCTGTTG GACTCAATCC GCGTCGTATT GGTTTGTTAA CTGTGTTGCG GCTGATGGGG
GCAGATATTG TTGAATCCAA TCGCCATGAA CAGGGTGGTG AGCCGGTTGC TGACCTACGT
GTGCGTTATG CGTCACTCCA GGGCACGCGT GTTCCTGAAG ATTTGGTGCC GGATATGATT
GACGAATTCC CTGCCTTGTT TGTCGCTGCA GCGGCAGCCG AAGGTCAAAC GGTAGTGAGT
GGTGCGGCTG AACTACGCGT TAAAGAATCG GACCGGTTGG CTGCGATGGT GACAGGCTTG
CGCGTGCTTG GCGTTCAGGT GGATGAGACC GCCGACGGGG CAACGATTCA TGGAGGGCCC
ATCGGTCATG GCACCATCAA CAGCCATGGC GATCATCGCA TCGCCATGGC GTTTTCAATT
GCAGGGCAGC TTTCCGTCAG TACAGTACGT ATTGAAGATG TCGCCAATGT TGCGACTTCT
TTTCCAGACT ATGAGACGTT AGCGCGCAGC GCTGGTTTCG GTCTTGAGGT GTACTGCGAT
CCAGCATGA
|
|---|
| Protein sequence | MSHRTHYYWI AHQGTPLHGV LSIPGDKSIS HRAVMFAALA DGTSRIDGFL EAEDTRSTAA
ILARLGVRIE TPSFTQRIVH GVGVDGLQAS DIALDCGNAG TGMRLLAGLL VAQPFDSVLV
GDASLSKRPM RRVTDPLSQM GARIDTSDDG TPPLRIYGGQ LLRGIDFISP VASAQIKSAV
LLAGLYARNE TVVREPHPTR DYTERMLTAF GVDIDVSTGC VRLRGGQRLC ATNITIPADF
SSAAFYLVAA SVIPGSDITL RAVGLNPRRI GLLTVLRLMG ADIVESNRHE QGGEPVADLR
VRYASLQGTR VPEDLVPDMI DEFPALFVAA AAAEGQTVVS GAAELRVKES DRLAAMVTGL
RVLGVQVDET ADGATIHGGP IGHGTINSHG DHRIAMAFSI AGQLSVSTVR IEDVANVATS
FPDYETLARS AGFGLEVYCD PA
|
|---|
| |