| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1391 |
|---|
| Symbol | |
|---|
| ID | 6202323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 1547328 |
|---|
| End bp | 1548194 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641702910 |
|---|
| Product | aldose 1-epimerase |
|---|
| Protein accession | YP_001830083 |
|---|
| Protein GI | 182681923 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACA TCCCCGGCCT GAGCACAGGT GATTTCCATG GTTTCCCCTC ACTGCTGATA
CAGACCCCGT TCTCACATGC AGCGATCAGT CTGTTTGGCG GGCAGTTGCT TTCATTTGTA
CCGAGCGGTG GAGAAGAAGT CATGTGGCTA TCCCCCCTGG TCCAGCCACC ACCCACTGCA
ATCCGCGGCG GTATCCCAGT CTGTTGGCCT TACTTTGGCC GCCAAGGGCA ACGCGACACC
ATGCCCGCGC ATGGGTTCGT GCGTACTGTG CCATGGCAAC AAGTGGAGAG CTGCCAAGAA
AACGATGGAA GTCTGTTTCT CGTCATGGCA CCGCCACCAC TCAAACACCT GGGGTTGCAT
CTGCGGATGA CACTGCGTAT CGGCCGCACC CTGGAACAAG AGTTAGCCAC CGAGAACATC
AGCCACGCTC CGATCAGCTT CACCCAAGCG CTGCACAACT ATTTCAGAGT CAGCAACGCA
CTACAGGTCA CGGTCCAAGG ACTGGATGGA GTGGAATATC TGGACAAATT CGAGGGCTAT
ACCCAACGCC ACCGCCAACA GGGCCATTGG ACCTTACAAG ATCCACATGA TCCTGGCCGT
GCGGATCGTA TCTACGTCGA CACCAGCGGC CATTATGTGC TGGTCGATCC ATTATTTTCC
CGGCGCATCG TGCTGACGAC GGAAGGCAGC CACAGCCTGG TGGTGTGGAA TCCAGGTCAC
GCTGGTGCAA GCAACATGAT TGATGTCGCC GACGGCTGGC GCGACTATCT CTGCCTGGAA
CCAGCTAATG CAGGACCAGA TGAAATCGAA CTGCTCCCCG GAGCACGCCA TGTGCTGCGC
CAGAGCATCG CCATCGCACC ACTGTAG
|
|---|
| Protein sequence | MFDIPGLSTG DFHGFPSLLI QTPFSHAAIS LFGGQLLSFV PSGGEEVMWL SPLVQPPPTA
IRGGIPVCWP YFGRQGQRDT MPAHGFVRTV PWQQVESCQE NDGSLFLVMA PPPLKHLGLH
LRMTLRIGRT LEQELATENI SHAPISFTQA LHNYFRVSNA LQVTVQGLDG VEYLDKFEGY
TQRHRQQGHW TLQDPHDPGR ADRIYVDTSG HYVLVDPLFS RRIVLTTEGS HSLVVWNPGH
AGASNMIDVA DGWRDYLCLE PANAGPDEIE LLPGARHVLR QSIAIAPL
|
|---|
| |