Gene XfasM23_1081 details

Gene Information

• Locus tag: XfasM23_1081
• ID: 6203863
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M23
• Kingdom: Bacteria
• Replicon accession: NC_010577
• Strand: +
• Start bp: 1225715
• End bp: 1226161
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 641702605
• Product: single-stranded DNA-binding protein
• Protein accession: YP_001829783
• Protein GI: 182681623
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000000301398
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACGCG GAATTAACAA GGTGATCCTA GTCGGCAACC TGGGGAACGA GCCGGATATC 
AAATACACCC AAAGCGGCAT GACGATCACC AACATTAGCC TAGCAACCAG CAGCAAACGC 
AAGGACAGAG AGGGCAATAC CCAGGAGCGG ACCGAATGGC ACCGCGTCAA GTTTTTCGGA 
AAGCTGGGCG AGATTGCCGC CGAATATCTG CATAAGGGAT CGCAGTGCTA CATAGAGGGT 
GCCATTCGCT ACGACAAGTT CACCGGCAAT GATGGGCAGG ACCGTTATGT CACTGAGATT 
ATTGCTGACC AAATGCACAT GCTCGGCGGT CGCGGCGAAG GCTCCAGCGG CATCACGCCA 
CAGCGGCGAC CGGCAAAGGT CCGTAACAAC GATAAAGCCT ATGCGTATGC AGGCGACGAC 
TTCCACGATG ACGCCCCCCC GTTTTAG 

 

Protein sequence

MARGINKVIL VGNLGNEPDI KYTQSGMTIT NISLATSSKR KDREGNTQER TEWHRVKFFG 
KLGEIAAEYL HKGSQCYIEG AIRYDKFTGN DGQDRYVTEI IADQMHMLGG RGEGSSGITP 
QRRPAKVRNN DKAYAYAGDD FHDDAPPF