Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0900 |
Symbol | |
ID | 6202893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 1069548 |
End bp | 1070201 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641702430 |
Product | colicin V production protein |
Protein accession | YP_001829609 |
Protein GI | 182681449 |
COG category | [R] General function prediction only |
COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGATC TGATCCTAGC CATCATCATC TTGGTTTCCG CATTATTGGG CCTATTACGT GGCTTTGTCA GCATTATAAT AAGTACCTCC TCCTGGCTAC TGGCCAGCTG GGCGACATTT GAGTTTGGCA ATACAGCGAG TCATTGGCTA GCAAGCCATG GTATTCCATC GACTACTGAA ATATTGTGTG GTTATGCGTT GGTGTTCATC GGGACTTTGA TGACAGTTGG CGCAGTGGGT ATGCTGATGC ACGCTGGGAT CAACGCAATA CGTTTAAACA ACATAGACCG CATATTCGGC TTTGCCTTAG GGACGTTTCG TGGCGGCTTC ATTGCTTGCT TACTGTTACT GATGATTGGC TACACTCCAT TGGCGCATGA ACCTGTTTGG CGCAACTCGC GATTGGTACC ATTACTACAA CCTGGAGTCT CATGGATGCG TGCTAAGTTA CCGCAGCGTT CATCTCCATT AACACCGCAG CGGTTGCCAT TGACAAGGCC AATGATAAAC AGGATGGGTT CAATCAACAT ATCAGTATCA GACGATAATC AACTGATCAG CCGTGTATTC CCCCCTTTGT CTAGTAATGA ACACGATAAA TCGCATTACG TCCCAGTCCA ACCTATCATC TACAAGCCAA CAACCACTTA TTAG
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Protein sequence | MIDLILAIII LVSALLGLLR GFVSIIISTS SWLLASWATF EFGNTASHWL ASHGIPSTTE ILCGYALVFI GTLMTVGAVG MLMHAGINAI RLNNIDRIFG FALGTFRGGF IACLLLLMIG YTPLAHEPVW RNSRLVPLLQ PGVSWMRAKL PQRSSPLTPQ RLPLTRPMIN RMGSINISVS DDNQLISRVF PPLSSNEHDK SHYVPVQPII YKPTTTY
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