Gene XfasM23_0900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0900 
Symbol 
ID6202893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp1069548 
End bp1070201 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content46% 
IMG OID641702430 
Productcolicin V production protein 
Protein accessionYP_001829609 
Protein GI182681449 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGATC TGATCCTAGC CATCATCATC TTGGTTTCCG CATTATTGGG CCTATTACGT 
GGCTTTGTCA GCATTATAAT AAGTACCTCC TCCTGGCTAC TGGCCAGCTG GGCGACATTT
GAGTTTGGCA ATACAGCGAG TCATTGGCTA GCAAGCCATG GTATTCCATC GACTACTGAA
ATATTGTGTG GTTATGCGTT GGTGTTCATC GGGACTTTGA TGACAGTTGG CGCAGTGGGT
ATGCTGATGC ACGCTGGGAT CAACGCAATA CGTTTAAACA ACATAGACCG CATATTCGGC
TTTGCCTTAG GGACGTTTCG TGGCGGCTTC ATTGCTTGCT TACTGTTACT GATGATTGGC
TACACTCCAT TGGCGCATGA ACCTGTTTGG CGCAACTCGC GATTGGTACC ATTACTACAA
CCTGGAGTCT CATGGATGCG TGCTAAGTTA CCGCAGCGTT CATCTCCATT AACACCGCAG
CGGTTGCCAT TGACAAGGCC AATGATAAAC AGGATGGGTT CAATCAACAT ATCAGTATCA
GACGATAATC AACTGATCAG CCGTGTATTC CCCCCTTTGT CTAGTAATGA ACACGATAAA
TCGCATTACG TCCCAGTCCA ACCTATCATC TACAAGCCAA CAACCACTTA TTAG
 
Protein sequence
MIDLILAIII LVSALLGLLR GFVSIIISTS SWLLASWATF EFGNTASHWL ASHGIPSTTE 
ILCGYALVFI GTLMTVGAVG MLMHAGINAI RLNNIDRIFG FALGTFRGGF IACLLLLMIG
YTPLAHEPVW RNSRLVPLLQ PGVSWMRAKL PQRSSPLTPQ RLPLTRPMIN RMGSINISVS
DDNQLISRVF PPLSSNEHDK SHYVPVQPII YKPTTTY