| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0731 |
|---|
| Symbol | |
|---|
| ID | 6202655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 860580 |
|---|
| End bp | 861047 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641702265 |
|---|
| Product | nuclear protein SET |
|---|
| Protein accession | YP_001829446 |
|---|
| Protein GI | 182681286 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2940] Proteins containing SET domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGTA GGATCGTCGC TCGCAAGTCC CGTATCCACG GCAACGGTGT GTTTGCTGTG
GTGTCGATCC ATCAGGGTGA GCGCATTATT GAATATAAGG GGCGCATCCG TACGCATGCT
GCGGTTGATG CCAATAGTCA TGGCCACATT GAGAGTGGTC ATACGTTTTT GTTTACGTTG
AATGATGATT ATGTGATTGA TGCCAATGAT GCTGGGAACA TTGCGCGTTG GATCAATCAT
AGTTGTTCTC CGAATTGCGA GGCAGTGGTT GAGGAGGATA CGGGCGGGAA CCGACGTAAA
GACAAGATAT TTATCCAGGC GATCCGTGAT ATCGCTTCTG GTGAGGAGCT GACTTATAAC
TATGGGATTG TGTTGGCAGA GCGCCATACG GCGCGACTGA AAAAGATCTG GGCGTGTTTA
TGCGGTTCGG ATCACTGTAC TCACACGATG CTTCAGCCCA AGCGTTGA
|
|---|
| Protein sequence | MSRRIVARKS RIHGNGVFAV VSIHQGERII EYKGRIRTHA AVDANSHGHI ESGHTFLFTL
NDDYVIDAND AGNIARWINH SCSPNCEAVV EEDTGGNRRK DKIFIQAIRD IASGEELTYN
YGIVLAERHT ARLKKIWACL CGSDHCTHTM LQPKR
|
|---|
| |