Gene XfasM23_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0601 
Symbol 
ID6203260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand+ 
Start bp711182 
End bp711862 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content54% 
IMG OID641702138 
ProductHhH-GPD family protein 
Protein accessionYP_001829319 
Protein GI182681159 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTGGT ACCCACGTGG TTTCGATGTT ATGGCAGCCT ATGATTATCT TTACCACTGC 
GACCCTGGGT TGTCGGGGTG GATGCAGCGT CTGGGTCCGT TGCCAGCTCT GCGGCGCTGG 
CGTCAGCCGT TCAACGTAGT TGATGCTCTG GCCAGAGCGA TCCTGTTCCA GCAACTGAGT 
GGTAAAGCGG CTTCAACCAT TGTTGCTCGT ATTGAGGCTG TGATTGGTAG CACCTGCTTA 
TATGCCGAAA CACTTGCGTG TATTGATGAT GCGTGCTTGC GTGCCTGCGG TGTCTCCAGC 
AACAAGATTC TGGCGTTACG CGATCTGACG CGGCGTGAAG TGGCAGGCGA GCTTCCCAGT 
GTGTGGCAGA TGGGGTCAAT GCACCATAAC ACCATCGTTG AAAAATTAAT TCCGATTCGT 
GGTATTGGTC GTTGGACTGT GGAGATGATG CTGATATTCC GTCTTGGCCG TCCCGATGTG 
CTGCCGGTGG ATGATTTAGG GGTACGCAAG GGTATCCAGC GTGTGGATAG CCTTGCTTTC 
GTCCCGACTC CGAAGGCGCT ATGTACCCGC GGCGAATGCT GGGCACCTTA CCGCACCTAT 
GCCGGGTTAT ATCTATGGCG GATTGCCGAT TTCCATGAAG GAGAAAGAGC GGTGATCTCT 
GATCGTTCGC AGGACGAGTA G
 
Protein sequence
MAWYPRGFDV MAAYDYLYHC DPGLSGWMQR LGPLPALRRW RQPFNVVDAL ARAILFQQLS 
GKAASTIVAR IEAVIGSTCL YAETLACIDD ACLRACGVSS NKILALRDLT RREVAGELPS 
VWQMGSMHHN TIVEKLIPIR GIGRWTVEMM LIFRLGRPDV LPVDDLGVRK GIQRVDSLAF 
VPTPKALCTR GECWAPYRTY AGLYLWRIAD FHEGERAVIS DRSQDE