| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0564 |
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| Symbol | |
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| ID | 6202301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 672123 |
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| End bp | 674012 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641702101 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001829282 |
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| Protein GI | 182681122 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.82908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTCCC GCTATAACGC CGCAGACATC GAAGTTCTCA CTGGCCTGGA CCCAGTCAAA
CGCCGCCCCG GGATGTATAC CGATACGACA CGTCCCAACC ATCTGGCACA GGAAGTTATT
GACAATTCAG TAGACGAGGC ACTTGCAGGC TACGCGAATC GAATTGAAGT CACACTCTAC
AAAGACGGTA GCTGCGAAGT CGCCGACAAC GGTCGTGGCA TGCCAGTGGA TATTCACCCA
GAAGAGAAGA TTCCCGGCGT TGAATTGATC CTGACCAGGC TACACGCTGG CGGCAAATTT
AGTAATCGCA ACTACACCTT TTCTGGAGGA TTGCACGGCG TAGGCGTGAG CGTAGTCAAC
GCACTGTCCA GTAAAGTTGA TCTCTTCATC AAACGCGAAG GTAGCGAACA CCACATGGAA
TTTCGCGAAG GCTTTGCCGT ATCCAAATTG AAAGTACTCG GCACAGTCAG CAAAAAAAAT
ACAGGTACAC GTCTGCGCTT CTGGCCTGAT TCAAAATACT TCGACACCCC TAAATTCAAC
GTACGTGTAT TGCGCCATCT ACTGCGTGCC AAAGCGGTCC TCTGCCCCGG TTTGACAGTC
GAATTACTTG AAGAGGCCAC AGGAGAGATC AACACATGGC ACTTCAAAGA CGGCTTACGC
GACTACCTTA AAGGCGAAAT GACCGAAAGT GAACTGCTGC CTGCTGAGCT GTTCATTGGC
TGCCTGAAGA AAGATACCGA AGTAGTGGAC TGGGCGGTCG CCTGGGTCCC CGAAGGAGAA
CTCACTCAAG AAAGCTACGT CAACCTGATC CCTACCCCAC AACATGGCAC CCACGTCAAT
GGACTGCGCT CAGGATTAAC CGACGCACTA CGCGAATTCT GTGACTTCCG CAATCTACTG
CCACGCGGAA TCAAACTGGC TCCGGAAGAT GTCTGGGATC GTGTCACTTT TGTGCTGTCG
CTGAAAATGA GTGACCCCCA GTTCTCCGGT CAAACCAAGG AACGCTTATC TTCACGCCAA
GCAGCTGGTT TCATTGAAAG CACAGTGCAT GACGCCTTCA GCCTATGGTT AAACCAGAAC
GTAGACATTG GCGAACACAT TGCGCAGATC GCTATTGAAC GTGCCAGCGC ACGTCTGAAA
ACCGAAAAAC AAGTCACCCG AAAGAAAATC ACCCATGGCC CCGCACTCCC CGGAAAATTA
GCCGACTGCA TCAGCCTGGA TCTTTCACGC ACAGAACTGT TCCTGGTAGA AGGCGACTCG
GCCGGAGGCA GCGCCAAACA AGCACGGGAC AAAGATTTCC AAGCGATCCT GCCGTTACGC
GGCAAAATCC TCAACACATG GGAAGTCGCC TCCGGCAGCG TCCTCGCCTC CGATGAAGTG
CATAACCTGG CAATCGCAAT CGGCTGCGAC CCTGGCAAAG ACAATCTCTC AGGATTGCGC
TACGGCAAAA TCGTCATCCT GGCCGACGCC GACTCCGACG GCCTACACAT CGCCACCCTG
CTTACCGCAC TCTTCCTCAA ACACTTCCCC GGACTCGTTG CAGCCGGTCA CGTGTTCGTG
GCAATGCCTC CCCTGTTCCG CGTCGACGTA GGCAAGCAAG TGTTTTACGC ACTAGACGAT
GAAGAAAAGA CCATACTGCT GGAAAAGATA CAGCGTGAAA AAATCAAGGG ACAAATCAGC
GTCACCCGCT TCAAAGGCCT AGGAGAAATG AACCCGCAGC AACTACGCGA ATCCACCATT
CATCCGGATA CACGCCGCCT CGTACAACTG ACCATGGATG ACAACACCCA GACTTGCTCA
CTGATGGACA TGCTACTAGC CAAAAAACGC GCAAGCGATC GTAAACAATG GCTGGAAACA
AAAGGTAACT TAGCGTCACT AGACATATAG
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| Protein sequence | MNSRYNAADI EVLTGLDPVK RRPGMYTDTT RPNHLAQEVI DNSVDEALAG YANRIEVTLY
KDGSCEVADN GRGMPVDIHP EEKIPGVELI LTRLHAGGKF SNRNYTFSGG LHGVGVSVVN
ALSSKVDLFI KREGSEHHME FREGFAVSKL KVLGTVSKKN TGTRLRFWPD SKYFDTPKFN
VRVLRHLLRA KAVLCPGLTV ELLEEATGEI NTWHFKDGLR DYLKGEMTES ELLPAELFIG
CLKKDTEVVD WAVAWVPEGE LTQESYVNLI PTPQHGTHVN GLRSGLTDAL REFCDFRNLL
PRGIKLAPED VWDRVTFVLS LKMSDPQFSG QTKERLSSRQ AAGFIESTVH DAFSLWLNQN
VDIGEHIAQI AIERASARLK TEKQVTRKKI THGPALPGKL ADCISLDLSR TELFLVEGDS
AGGSAKQARD KDFQAILPLR GKILNTWEVA SGSVLASDEV HNLAIAIGCD PGKDNLSGLR
YGKIVILADA DSDGLHIATL LTALFLKHFP GLVAAGHVFV AMPPLFRVDV GKQVFYALDD
EEKTILLEKI QREKIKGQIS VTRFKGLGEM NPQQLRESTI HPDTRRLVQL TMDDNTQTCS
LMDMLLAKKR ASDRKQWLET KGNLASLDI
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