| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0457 |
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| Symbol | |
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| ID | 6203320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 548959 |
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| End bp | 549957 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641701991 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001829178 |
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| Protein GI | 182681018 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.116762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGTTA CCGTCAGCCA GGTTCTGCGT CCTCGAGGTC CGCAGATCGA ACGTCTTACA
GAAAACCGTG CCAAGGTTGT ACTTGAGCCT TTGGGTCGCG GGTATGCTCA TACATTAGGT
AATGCATTGC GTCGTGTCCT GCTTTCTTCG ATTCCGGGAT TCGCGATTAC AGAAGTGGAA
ATTGATGGTG TGTTGCATGA GTACACAACA GTCGAAGGTT TGCAGGAAGA TGTGCTTGAA
GTTTTGTTAA ATCTTAAGGA TGTGGCGATC CGTATACATA GTGGTGATAC TGCTACTCTT
TCTTTATTTA AACAAGGAGC AGGAGTGGTG ACTGCTGCGG ATATTAAGAC GGACCATAAT
GTTGAAATTA TCAATGATGG TCACGTCATA TGTCATTTGA CTAAAGACAC TACAATTAAT
ATGCGTTTGA AAATTGAGCG TGGTTTTGGT TATCAGCCTG CTGTTGTCCG TCGTCGTCCT
GATGATGAAA ATAGAACCAT TGGTCGTTTG ATTTTGGATG CCTCGTTTTC TCCGGTTCGT
CGTGTTGCTT ATGTCGTTGA GGCGGCACGT GTAGAGCAAC GTACTGATTT GGATAAACTC
ATTATTGACA TCGAAACAAA TGGTACGATA GACGCTGAAG AAGCTCTTCG TACTGCTGCT
GATATTCTTA CTGATCAGCT GTCGGTGTTT GGTGATTTTA CGCACCGTGA TCGTGGTACA
GTCAAACCTG CTAGTAGTGG TGTGGATCCT GTGCTGCTTC GTCCAATTGA TGATTTGGAG
TTGACGGTGC GTTCTGCTAA TTGTTTGAAG GCGGAGAGTA TTTATTATAT TGGTGATCTT
ATCCAAAAAA CAGAGGTTGA GTTGCTTAAG ACTCCCAATT TAGGTAAGAA GTCGCTTACT
GAGATTAAAG AAGTTCTTGG CCAACGTGGT TTAGGACTTG GAGTGAAGTT GGAGAATTGG
CCGCCTCCAG GTGTTTCTCA ATATGGAATG CTTGGTTAA
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| Protein sequence | MTVTVSQVLR PRGPQIERLT ENRAKVVLEP LGRGYAHTLG NALRRVLLSS IPGFAITEVE
IDGVLHEYTT VEGLQEDVLE VLLNLKDVAI RIHSGDTATL SLFKQGAGVV TAADIKTDHN
VEIINDGHVI CHLTKDTTIN MRLKIERGFG YQPAVVRRRP DDENRTIGRL ILDASFSPVR
RVAYVVEAAR VEQRTDLDKL IIDIETNGTI DAEEALRTAA DILTDQLSVF GDFTHRDRGT
VKPASSGVDP VLLRPIDDLE LTVRSANCLK AESIYYIGDL IQKTEVELLK TPNLGKKSLT
EIKEVLGQRG LGLGVKLENW PPPGVSQYGM LG
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