| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0308 |
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| Symbol | |
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| ID | 6204125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 393976 |
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| End bp | 396888 |
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| Gene Length | 2913 bp |
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| Protein Length | 970 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641701840 |
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| Product | beta strand repeat-containing protein |
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| Protein accession | YP_001829031 |
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| Protein GI | 182680871 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000319801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGA TATTTGCTGC CAGGACGATC TTGGCATCCG CATTGGCTGC TGCTTTGAGT
GCCTGCGGCG ATCCATTAGT TCGCTCAGAG ACACCGACGA CACCGACGAC ACCGACGACT
CCGACGACTC CGACGACTCC GACGACTCCG ACGACTCCGA CGACTCCGAC GACACCGACG
ACTCCGACGC CATTGCCTGA TTTGGATCCG GCGTTAGCTG CCAAGTTTCG CGCGCACCTA
GATGTTACGA ATACAGAACC CGCTCATACA CTTGGCTTTA CTGGCAAGGG TTACATGATT
GGTGTGGTCG ACTCCGGTGT GAATCCTGAC CATGTCACGT TGCAGGGGAG GGTGATCCGC
AACAATGTGT ATGTGGATTA TCAAGATCCC TCTAGTCCAC ATGATGTTGA TGGCCATGGC
ACCACCGTGG CACAGCTTGC TGCGGGTAGG CCGTTTGGCG ACTTTCCCGG TGGTATCGCA
CCAGGTGCGA CTATCTTCTC AGCGCGCGTC TTCTCGTCTG CAGCAGAAAG TGCAAAAGAA
GATCCAATAG GCGGGAACTT TTTTGAAGGA GAAGCAGCGC TGCTAAAACG CGTCAATGCC
GACATGATTG CCGCAGGAGT GCGTATCCAA AACAACTCCT GGGGATATGA GAGTGATGAC
TCAAATGGTG AGCCAATATG GACAAGTCCA ATCATCACTG GTTTGTTCGT GAATGCATAC
CGTGATTTAG TGCTGAATAA CAATGGCTTA ATGATATTCG CCAGTGGTAA CGAAAAACAA
ACACAACCGG GTCGACTTTC CAGATTGCCG AGCTTGCCCA CTGTGGAGGG GGGGGCATCG
CCTGCCGACC TGGAAAGGGG ATGGTTAGTG GTCGCTGCAC TGGATAGTTT CGATCATCCC
GACCAATTGG CTTCGTACTC GAACCATTGC GGCATCGCAA TGCACTATTG TTTAGCTGCA
CCAGGTGATG TCATTACAGT CAATAGCAGC GTGACCAACA GCTCTTCTGT TAGTGATAAA
TATTATGTGG GACAGGGGGG CACCTCATTT GCAGCGCCGT TGGTCTCTGG TGCAGCGGCA
TTGGTATGGG AGGCATTTCC CTATTTCAGC AACGACCTGG TGCGGCAGAC CCTGCTTGGC
ACGGCGACTG ATCTTGGTGC CCCTGGCGTG GATGAAGTCT TCGGCTATGG TGCACTGAAT
GTGGGTAAAG CAGTGCTGGG CCCGGCTAAG TTCGATTGGG GTGATGTCCA AGTCAGCTTC
GATGACAGGC GTTCCACCTG GGGCAATGAC ATCACCGGCA GCGGCGGCTT GATCAAGCGT
GGTACCGGAA CACTGGTGCT TGGCGGCAGC AATAATCAAT ACACCGGAGC CACCCAAGTC
CTGGGAGGTA CATTGCAAGC GTCCAGCTTG GGTGCATCCG CAGTTAGCGT TGCTAATACT
GCGACGTTGA TTGGTAGCGG TCGCTTCGGC GGTGCGGTGA GCAATGCCGG CACCCTGGAG
CTTGGGAAGG ATGGGCTCAA GGTGCAGGGT GATTACACCC AATTGGAGAC AGGGCGTCTT
GCACTGTACG TTGGAGATCA GCTGAGCGTG GCCGGTAATG CCACCCTGAA AGGGGGGGAA
CTCCAAGTGT TGGGTAAACG TGATTATGTG ACCTTCAATA CTTCCTACAG CGTATTGCAG
GCTGATGGTA GTTTGACCGG CACGTTCTCG CAGTTGACCT GGGGTCCGGC TGTGCTGCTT
GGAGAAGGTC GTCTGACCTA CGGCGCTAAC AATGCCTACG TGACCCTGCA GCGTCTGAAT
GTCAGCGCGG CGGCACAGGC CTTGGGGATC GTTGATAGAG TTGCGCAGGC CTCTGCCCAG
CGTGTTGAGC AGGCATTTCG TGCAATTGAT GCACAGCAGG CGCAAGGCCG CGGTGCGTTG
CCCACCAGTT TTATTGGGGC GGCGGCGGCA TTGCAACAGT CCAGTAGCGC GGCAGTGGCG
GCGGGTTCGT TGCAGAGTTT GTCGGGGCAA TCGCATGTTG CGGCGGCGGC GGCTAGCCTT
GATGCAATCG ATTTGGGGCG CCGCAGTTTG GCGACGCGTC TAGATGTGCT TCGTTCGGGC
GAGCGTATTG TGACGTGGCA TCAAGCCTTG GGTGGTCCGG GGCACAATGG TGCGGCTAGC
GGCACCTTCT CCCTGTCTGG CTGGTTGGTG GGACATGATG CGCAACTTGC CTCCGGTGAC
ATTGTGGGTG TTGCTTTTGG TCAGGCCGAT AGCAGCCCCT CCGGTAGTGC CTCTGGGTTG
CGAGGGATAG ACAGACAAGT GCAAGGGCGT GTGTATTTGC AGCGCACCCA GGGGCCCTTG
TATGTTTTGG GGCAGCTTGG TTTTGGTAGT TTCCAACGTC GTCTGGACCG GCAGTTGCAA
CTGGGTGATT GGAACGATTG GACATCCAGT CGCTACAGCG GTCAGTTTTG GAGTGGCAGT
GTGGAGGCTG GCTATCACTG GCGTCAGGGT TCCTTGGCAT TGACCCCGTA TCTTGGTCTG
GATCAAACGC AACTGCGGAC GGATGGATTC CGTGAGCAGA GTGGCTCTGG CTTTGGCTTA
CAGGTACAGT CCGCCCAAGC GACGCGGAGT CAGTTACTGG CCGGTGTGCG TACGGAGTGG
CGCTGGGGTG GCGTGCAATG GCGTGGTTAT GGTGAATGGC AGCAGACGTT GCGTCAGAGT
GGTTTGAATC CACAGGCCAG CTTTACAGCG ACTTCGTCGT GGACGCCGTT GGTGGCTTCG
TCCTGGCCTG GTCGTTCTGG GGGTGTGCTT GGATTATCGA TGGTCTTGCC TGTCGGAGTG
ACCGCAGGTC TGTGGACCAT GGGGTTAGAG CATTACTTTG GTACACGTAG CCGTGGGGAG
AGTCTTGGAC TGCGTTACCA GCTTGGTTTT TAG
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| Protein sequence | MKTIFAARTI LASALAAALS ACGDPLVRSE TPTTPTTPTT PTTPTTPTTP TTPTTPTTPT
TPTPLPDLDP ALAAKFRAHL DVTNTEPAHT LGFTGKGYMI GVVDSGVNPD HVTLQGRVIR
NNVYVDYQDP SSPHDVDGHG TTVAQLAAGR PFGDFPGGIA PGATIFSARV FSSAAESAKE
DPIGGNFFEG EAALLKRVNA DMIAAGVRIQ NNSWGYESDD SNGEPIWTSP IITGLFVNAY
RDLVLNNNGL MIFASGNEKQ TQPGRLSRLP SLPTVEGGAS PADLERGWLV VAALDSFDHP
DQLASYSNHC GIAMHYCLAA PGDVITVNSS VTNSSSVSDK YYVGQGGTSF AAPLVSGAAA
LVWEAFPYFS NDLVRQTLLG TATDLGAPGV DEVFGYGALN VGKAVLGPAK FDWGDVQVSF
DDRRSTWGND ITGSGGLIKR GTGTLVLGGS NNQYTGATQV LGGTLQASSL GASAVSVANT
ATLIGSGRFG GAVSNAGTLE LGKDGLKVQG DYTQLETGRL ALYVGDQLSV AGNATLKGGE
LQVLGKRDYV TFNTSYSVLQ ADGSLTGTFS QLTWGPAVLL GEGRLTYGAN NAYVTLQRLN
VSAAAQALGI VDRVAQASAQ RVEQAFRAID AQQAQGRGAL PTSFIGAAAA LQQSSSAAVA
AGSLQSLSGQ SHVAAAAASL DAIDLGRRSL ATRLDVLRSG ERIVTWHQAL GGPGHNGAAS
GTFSLSGWLV GHDAQLASGD IVGVAFGQAD SSPSGSASGL RGIDRQVQGR VYLQRTQGPL
YVLGQLGFGS FQRRLDRQLQ LGDWNDWTSS RYSGQFWSGS VEAGYHWRQG SLALTPYLGL
DQTQLRTDGF REQSGSGFGL QVQSAQATRS QLLAGVRTEW RWGGVQWRGY GEWQQTLRQS
GLNPQASFTA TSSWTPLVAS SWPGRSGGVL GLSMVLPVGV TAGLWTMGLE HYFGTRSRGE
SLGLRYQLGF
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