| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2948 |
|---|
| Symbol | |
|---|
| ID | 8650496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 3274672 |
|---|
| End bp | 3276588 |
|---|
| Gene Length | 1917 bp |
|---|
| Protein Length | 638 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003327512 |
|---|
| Protein GI | 269957723 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGACG TCGACGTCGA GGGAGCGAGA GCCGTGAGCA CGGCTGAGAC CCCCGGGCGC
CTCGCAGCAG GAACCGAGAT CGGCGGCTAC ACGATCCAGT CCCTGCTCGG CAAGGGGGCC
ATGGGTGCGG TGTACAAGGC GGTCGACGGC GGTGGTACCG CCGTCGCGCT CAAGGTGCTG
CACGCACACC TCGACCGCGA ACCCGTCGCA CGCCAACGGC TGCGCCGCGA GGTCGCCGCC
CTGCAGAAGC TGCGCCACCC CGCCGTCGCC CGCGTCCTCG ACGCCGAGCT CGACGGCGAA
GGCGCGTTCG TCGTCACCGA GCTCGTCGAG GGCCGCACCC TCGAAGCGGA GGTCGACGAC
GGCGGACCCC TCGACGCCGT CGACCTCTAC GAGCTCGCCG ACCAGCTCGC CGCCGCCCTC
GAAGCCGTCC ACCTCGCCGG CGTCGTCCAC CGCGACCTCA AACCCTCCAA CGTCATGATC
ACGCCCCGCG GACCCGTGCT CATCGACTTC GGCATCGCCA CCCACCAGAC CGAGGACGGC
GGCACCCTCA CCTCGCCCGG GTTCGTCATC GGCACCCCCG GCTACCTCGC CCCCGAGCTG
CTCGACGGCG GCGCTCCCAC CCCCGAGTCC GACTGGTGGA GCTGGACCGC GCTGCTCGCC
TTCGCCGCCA CCGGACGATC CCCCTTCGGC GTCCGGCCCA CCGACCTGGT GCTGCGGCGC
TCGCGGGAAG GCCGCGCCGA CCTGGTCGGG CTGCCCGCCC GCACCGCTCG GGCGCTCGCG
GGGGCCCTGC AGGCCGACCC CGACGTGCGC TGGGGGCCCA CCCAGGTGGC CCGCGCCCTG
CGCCGCGACG CCGACGAGGC GTCCTTCGCG GCGACCGTGG GCGGCGCCGC CGTGGCCGGT
GTGGCCGGCG TCCCGCCCGG CCGGGGCGAC GACGCGACGC AGCGCATCGC CGTCCACCCC
GACGGCGGCA CCGGGCGCTG GTCCGACGGC GGTGCGCCCA CCGGGGAGAC CGCCGTCGTC
GGCGCGCCGA CGCAGCTCGT GGGGCCGCCG GCCGCGCCCG GGGCGACGCC GGCCGACTCT
GCGGGTGCTG CGGTAGGGGC CGCCGGGCTC GGGGCCAACG ACGGGCTCAC CCGCCAGGTC
CCCGTCGTCG CGGGCGTGAG CCCGGTCGCC ACCGGACCGA TCCCCGTGGG CGAGGTGCGG
TACCAGGCGT ACGAGGAGCT CGCCGATGCC GTGGAGGACG ACGACGCCGA GCCCGTCGAG
CCGCTCCCGC CCGAGCCGTA CGTCGCCCCC GTCCGGCCGC GGCGCACCGG CACCGTCCTC
GCGTTCGCCG CGCCCCTGGT CGTCCTCGGT GGCACGCGCC CCGTCGTCGC GTTCGGGGTG
CTGGCCGCGC TGGTGATCCT GTGCCGGATC GCGGGGCACA CGTCGCAGGC GCTGCAGGAC
CGCCGCGAAC GGCACGGCGT CGTCCGGCGG TCCGACGGCG TCGTGGCCAC GATCGCGTTC
CCCTGGCACG CCGTCATCGG CGCGTTCGGG GCGATCCCGC AGCTCCTCGT CTCCGGCTGC
GTCGGCGTGC TCGCCGTCGT CGGCGGCTAC TGGCTGTTCG GGCCGGCGCG GCTGATCGTC
ATGCCGCGCG AGGACATCGA GGCCCGCTCG GTCGGCGGGA TGAACGAGAC CGTCGTGTTC
GTCGGCGTGC TGGCCTTCGC GACCCTCCTG GCCGTGATCG TCACCTGGTT CGGTCCGGCC
GGGATGACGG GCCGCAACGG CGCCCGGGTG CTGCTGCACA CGTTCGCACC GGGGTGGATC
GGCGCCGCCG TGATCATCGT CGCCTGCCTG ATCGGCGCGT GGCTGCTGGC CCGGCCGCTG
CTCGACGTGA CGCCGGTGAT CGACTGGTGG CCGCTCGGCG GTCCGCCGTC GCTGTAG
|
|---|
| Protein sequence | MGDVDVEGAR AVSTAETPGR LAAGTEIGGY TIQSLLGKGA MGAVYKAVDG GGTAVALKVL
HAHLDREPVA RQRLRREVAA LQKLRHPAVA RVLDAELDGE GAFVVTELVE GRTLEAEVDD
GGPLDAVDLY ELADQLAAAL EAVHLAGVVH RDLKPSNVMI TPRGPVLIDF GIATHQTEDG
GTLTSPGFVI GTPGYLAPEL LDGGAPTPES DWWSWTALLA FAATGRSPFG VRPTDLVLRR
SREGRADLVG LPARTARALA GALQADPDVR WGPTQVARAL RRDADEASFA ATVGGAAVAG
VAGVPPGRGD DATQRIAVHP DGGTGRWSDG GAPTGETAVV GAPTQLVGPP AAPGATPADS
AGAAVGAAGL GANDGLTRQV PVVAGVSPVA TGPIPVGEVR YQAYEELADA VEDDDAEPVE
PLPPEPYVAP VRPRRTGTVL AFAAPLVVLG GTRPVVAFGV LAALVILCRI AGHTSQALQD
RRERHGVVRR SDGVVATIAF PWHAVIGAFG AIPQLLVSGC VGVLAVVGGY WLFGPARLIV
MPREDIEARS VGGMNETVVF VGVLAFATLL AVIVTWFGPA GMTGRNGARV LLHTFAPGWI
GAAVIIVACL IGAWLLARPL LDVTPVIDWW PLGGPPSL
|
|---|
| |