| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2913 |
|---|
| Symbol | |
|---|
| ID | 8650460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 3235369 |
|---|
| End bp | 3236268 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003327479 |
|---|
| Protein GI | 269957690 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCG GCACCGCCGC TGTGGGACGG GTGCGGGCGC GGAAGAGCCA CCCGGTCTCC
TTCCTGATCC CCGCCTTCGC CGTCCTCGCC GTCTTCTACT TCCTCCCGAC GATCTTCAAC
TTCATCTACG CGATGACGGA CTGGTCAGGC TTCCGAGCGG AGATCAACTT CGTCGGGTTC
CGGAACTTTG CCGACCTCCT GCGGTCCGGC ACGCTGCTCA GCTCGCTGAG AATCACCATC
GTGTTCGCCG TGCTGGTCGC GGTGTTCCAG AACTTCTTCG GGATGATCCT CGCGCTGCTG
CTCGAGAGGG ACACGAAGGT CAACCGTTTC GCACGAGTGA TGTTCTTCAT CCCCGTCATC
ATGTCCGCGC TCGCCGTGGG TTACGTCTGG CAGGCGATGC TGCGCCCCGA CGGCGGCGTC
AACCAGTTCC TTGGTTCCTT CCTGGGGCGT GAGATCACCG TCGCCTGGCT GGGTTCGACG
ACGTGGACGA TCGTCGTCGT CGCACTCGTC CACTCCTGGA AGTGGATGGG CCTGTCGATG
CTCATCTACC TGGCCGGCCT CAAGACCATC AACGAGGACG TCCTCGAGGC TGCCCGCCTC
GACGGGGCGG GCTCGTGGCG CATCTTCAAG GACATCCGGT TCCCGCTGCT CGCCCCCGCG
GTCACCTTCA ACGTCGCCAC GGCGCTCCTC GGCTCCATGA ACGGCTTCGA CATCGTGCAG
GCCACGACCG GTGGTGGCCC GGCCGGCTCG ACGGAGCTGC TCAACATCTT CATCTTCCGG
ACGTTCGGCC AGGGCCTGTT CGCTCAGGCC ACGACGATGA GCCTCGTGCT GTTCCTCGTG
GTCGTCGCCC TCGCGTTCCC GGTGATCCGC ACTCTTCGCA AGCGGGAGGA AGTCCTGTGA
|
|---|
| Protein sequence | MSAGTAAVGR VRARKSHPVS FLIPAFAVLA VFYFLPTIFN FIYAMTDWSG FRAEINFVGF
RNFADLLRSG TLLSSLRITI VFAVLVAVFQ NFFGMILALL LERDTKVNRF ARVMFFIPVI
MSALAVGYVW QAMLRPDGGV NQFLGSFLGR EITVAWLGST TWTIVVVALV HSWKWMGLSM
LIYLAGLKTI NEDVLEAARL DGAGSWRIFK DIRFPLLAPA VTFNVATALL GSMNGFDIVQ
ATTGGGPAGS TELLNIFIFR TFGQGLFAQA TTMSLVLFLV VVALAFPVIR TLRKREEVL
|
|---|
| |