| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2795 |
|---|
| Symbol | |
|---|
| ID | 8650340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 3101404 |
|---|
| End bp | 3102300 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003327367 |
|---|
| Protein GI | 269957578 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG CAACGTTGCC CCCGAAGCAG GTGCAGGCGG CGCTGCCCCG GGTACGCCGC
GACCGCAGCT CCCGGCTCTC GCACAAGGTC TTCGTCTACC TGGGCGTCGC AGCGATCGTC
GTGTACTGCC TCGCGCCGTT CTACTGGATG ATCGTGTCCA GCCTGCGCCG GGGCTCGGAC
ATCTTCGACA AGTCGGCCTG GCCCAGCCCG GTGTCCTTCG AGAACTACCT CGCGGTGTTC
GACACGTCCC GCGGGTTCGG CCAAGCCATC GTCAACAGCG TGATCGTCGC CGGGACGACC
ACCGTGCTCG CCCTGTTCGT GGCCATCATC ACCTCCTACG CGCTGGCCCG GCTGCACTTC
CGGGCCAAGC GCCTGGTGCT GACGGTCATC GTGGCGACGT CCATGTTCCC CCTGGTCGCG
ATCATCGTCC CGCTGCTCAA GCTGTTCACC GCATGGGGCT GGATCAACAC CTACCAGTCG
ATGATCGTCC CCGGCCTGTC CTTCGCACTC CCGCTCGCGG TGTGGAACCT CACCAGCTTC
TTCAAGCAGA TGCCGGCCGA GCTCGAGCAG GCCGCGATGA TCGACGGCTG CAGCCGCGGT
CAAGCCTTCC GGCTGGTCAT CCTGCCGCTG GCCGCACCAG GGGTGTTCAC CACCGCCATC
ATCGTGTTCG TCTCGGCCTG GAACGAGTTC CTCATCGCCC TGACCATGGT CAACAAGGCA
TCCATGCAGA CAGCGCCGGT AGCCATCTCC AAGTTCGTCG GCGCCACCCA GTTCGAGCAG
CCGTTCGGCA GCCAGATGGC CGCCGGGGTG GTCGTGACCA TTCCGCTGGT GATCCTCGTG
CTGCTGTTCC AGCGGCGCAT CGTCGCCGGC CTCGCCAGCG GTGGCGTCAA GTCGTAG
|
|---|
| Protein sequence | MTTATLPPKQ VQAALPRVRR DRSSRLSHKV FVYLGVAAIV VYCLAPFYWM IVSSLRRGSD
IFDKSAWPSP VSFENYLAVF DTSRGFGQAI VNSVIVAGTT TVLALFVAII TSYALARLHF
RAKRLVLTVI VATSMFPLVA IIVPLLKLFT AWGWINTYQS MIVPGLSFAL PLAVWNLTSF
FKQMPAELEQ AAMIDGCSRG QAFRLVILPL AAPGVFTTAI IVFVSAWNEF LIALTMVNKA
SMQTAPVAIS KFVGATQFEQ PFGSQMAAGV VVTIPLVILV LLFQRRIVAG LASGGVKS
|
|---|
| |