| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2530 |
|---|
| Symbol | |
|---|
| ID | 8650073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 2764495 |
|---|
| End bp | 2765364 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003327103 |
|---|
| Protein GI | 269957314 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCA CCCTCGTCCC CCGTCTCCCG CTCGGGCAGT GGGTCGACAC GTTCGTCGAC
TGGGTCACTG CGACGTTCCG GCCCTTGTTC CGCTTCATCA AGGACGTCCT CGACGGCGTC
TACGACGGCC TCGACACCAT CCTGTCCGGT CCCCCGTTCT GGGTGGTCGC GATCGTGCTC
GCCGCCCTCG CGCTCTTCGC CAAGGGCTGG AAGCTCGCGC TCGGGTCGCT CGTCGGCTTC
GTCGTGATCG CGGGCGTCAA CCAGTGGGGC AACGCGATGG ACACGCTCGC GCTCGTCCTG
CTCTCCGCCG CGATCGCCCT GATCCTCGCC GTGCCGCTCG GCATCTGGGC AGCCCGCAAC
GAGCGGGTGT CGCAGACCCT GCGCCCGGTG CTCGACTTCA TGCAGACGAT GCCCGGCTTC
GTCTACCTCA TCCCGACCGT CGTCATCTTC CTCACCGGCC CCGTCCCCGG GATCATCGCG
ACGATCATCT TCGCCATGGC GCCGGGCGTC CGGTTCACCG AGCTCGGGAT CCGGCAGGTC
GACAAGGAAG TGGTCGAGGC CGGCCACGCG TTCGGCGCGA CCCCCGGCCG GATCCTGCGG
CAGATCCAGC TCCCGCTCGC TCTGCCCACG GTCATGGCGG GCGTCAACCA GGTGATCATG
CTCTCGCTGT CCATGGTCGT CATCGCCGGC ATGGTCGGCG CCGGCGGCCT CGGCAACGAC
GTGGTCGCCG CGCTGCAGCG CGTCGACGTC GCGCTCGGCT TCGAGGCCGG CCTCGCCGTC
GTCATCCTCG CGATGTTCCT GGACCGCGTG ACCTCCGCCC TCGGCGAGCG CGCCCCTGTC
TCCCGGGCCC TGGCCGCGAC GCGCGCCTGA
|
|---|
| Protein sequence | MTGTLVPRLP LGQWVDTFVD WVTATFRPLF RFIKDVLDGV YDGLDTILSG PPFWVVAIVL
AALALFAKGW KLALGSLVGF VVIAGVNQWG NAMDTLALVL LSAAIALILA VPLGIWAARN
ERVSQTLRPV LDFMQTMPGF VYLIPTVVIF LTGPVPGIIA TIIFAMAPGV RFTELGIRQV
DKEVVEAGHA FGATPGRILR QIQLPLALPT VMAGVNQVIM LSLSMVVIAG MVGAGGLGND
VVAALQRVDV ALGFEAGLAV VILAMFLDRV TSALGERAPV SRALAATRA
|
|---|
| |