Gene Xcel_1988 details

Gene Information

• Locus tag: Xcel_1988
• ID: 8649518
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: -
• Start bp: 2142968
• End bp: 2145115
• Gene Length: 2148 bp
• Protein Length: 715 aa
• Translation table: 11
• GC content: 71%
• Product: DNA topoisomerase (ATP-hydrolyzing)
• Protein accession: YP_003326565
• Protein GI: 269956776

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCACCA CCGCCTCCCC GGAATCGAGC TCCGCCGAGA AGAACTACAC GGCCCGGCAC 
CTCTCGGTGC TCGAAGGGCT GGAGGCGGTG CGCAAGCGTC CGGGCATGTA CATCGGGTCC 
ACCGACTCGC GCGGCCTCAT GCACTGCCTG TGGGAGATCA TCGACAACTC GGTCGACGAG 
GCGCTGGGCG GGTTCGCCAC GAAGATCGCG GTCGTGCTGC ACGCGGACTC CTCGGTGACG 
GTGACCGACG ACGGTCGCGG GATCCCGGTC GACGTCGAGC CCAAGACGGG CCTGAGCGGT 
GTCGAGGTCG TGTTCACCAA GCTGCACGCG GGCGGCAAGT TCGGCGGCGG GTCCTACACG 
GCCTCGGGCG GTCTGCACGG TGTCGGCGCG TCCGTCGTCA ACGCGCTGTC GGCGCGGCTC 
GACGTCGAGG TGGACCGCGG CGGCAAGACG TACCGGATGA CGTTCCACCG CGGTGAGCCG 
GGCACCTTCG CCGACGGCCC GGCGGGGGCG TCGCCCGAGT CGGCGTTCTC GCCGTTCATC 
GAGCGCAGCG AGCTCGCCGT CGTCGGCCGG GCCAAGCGTG GGGTGACGGG CACCCGCGTC 
CGGTACTGGG CCGACCGGCA GATCTTCCCG AAGTCCGCGG TGTTCAGCTA CGACGAGCTG 
GTCACGCGCG TGCGCCAGAC GACGTTCCTG GTGCCGGGCC TGGAGATCAC CGTGCGCGAC 
GAGCGCGGCC TGCCGGGGAC TCCGGGCGCC GACGGGCCGC ACGAGGAGAT GTTCGTCCAC 
CACGGCGGAG CGGTCGACTT CGTCGACTTC CTCGCCCCGG ACGCGCCCGT CACGGCGACG 
TGGACGCTGC GCGGCAGCGA GACGTTCACC GAGACGGTGC CGGTGCTCGA CGAGCGCGGC 
CACATGTCGC CGCGCGAGGT GCAGCGGGAC TGCGAGGTCG ACATCGCCCT GCGCTGGGGC 
ACCGGCTACG ACACCGAGCT GCGCACCTTC GTCAACATCA TCGCCACGCC CAAGGGCGGC 
TCCCACCTCA CCGGGTTCGA GCAGGGCCTG GTCAAGGTGG TGCGCAAGCA GGTCGAGGCC 
AACGCCCGCC GCCTGAAGAT CAGCGCGAAG GACGGCGGGG AACGGCTCGA GAAGGACGAC 
ATCACCGCGG GCCTGACCGC CGTCGTGACC GTTCGCCTGG CCGAGCCGCA GTTCGAGGGC 
CAGACGAAGG AGGTGCTGGG CACCGCGCCG GTGCGCGCGA TCGTCGCACG CACCGTCGAG 
AAGCAGCTCG GCGCGATCCT CACCTCCACC AAGCGGGACG ACAAGGCGCA GGCCTCGCTG 
CTGCTCGACA AGGTGGTCGC GGAGATGCGG GCGCGGGTGT CGGCGCGCAA GCAGAAGGAG 
ATCTCGCGGC GCAAGAACGC GCTGGAGACG TCCTCGCTGC CGGCCAAGCT GGCCGACTGC 
CGGTCCGACG ACGTCGAGCG CTCGGAGCTG TTCATCGTCG AGGGCGACTC GGCGCTCGGC 
ACCGCGAAGC TTGCCCGGTC CAGCGACTTC CAGGCGCTCC TGCCCATCCG CGGCAAGATC 
CTCAACGTCC AGAAGGCGTC CATCAGCGAC ATGCTGCGCA ACGCCGAGTG CGCGGCCATC 
ATCCAGGTGC TGGGCGCCGG CTCGGGCCGG TCCTTCGACC TGGACGCCGC GCGCTACGGC 
AAGGTCGTGC TGATGACCGA CGCCGACGTC GACGGTGCGC ACATCCGCAC CCTGCTGCTC 
ACGCTCTTCT ACCGGTACAT GCGTCCGCTC GTGGAGGCCG GCCGCGTGTT CGCGGCCGTG 
CCGCCGCTGC ACCGCATCGA GGTGTACGGG GCGCGCGGCA AGGGGAACGA GTACATCTAC 
ACGTACTCGG AGGCCGAGCT GCAGGCCACG CTCAAGCGGC TCGACCGTGC GGGCAAGCGC 
TACAAGGACG ACATCCAGCG CTACAAGGGT CTGGGCGAGA TGGACGCCGA CCAGCTCGCG 
GAGACGACGA TGGACCCCCG CCACCGCACG CTGCGCCGCG TCACCGCCCA GCACGCCGAG 
GCGGCCGAGC GCGTCTTCGA GCTGCTCATG GGCTCCGACG TCGCGCCGCG CAAGGACTTC 
ATCATCTCCG GGGCGGAGTC GCTGGACCGC TCGCGCATCG ACGCCTGA 

 

Protein sequence

MTTTASPESS SAEKNYTARH LSVLEGLEAV RKRPGMYIGS TDSRGLMHCL WEIIDNSVDE 
ALGGFATKIA VVLHADSSVT VTDDGRGIPV DVEPKTGLSG VEVVFTKLHA GGKFGGGSYT 
ASGGLHGVGA SVVNALSARL DVEVDRGGKT YRMTFHRGEP GTFADGPAGA SPESAFSPFI 
ERSELAVVGR AKRGVTGTRV RYWADRQIFP KSAVFSYDEL VTRVRQTTFL VPGLEITVRD 
ERGLPGTPGA DGPHEEMFVH HGGAVDFVDF LAPDAPVTAT WTLRGSETFT ETVPVLDERG 
HMSPREVQRD CEVDIALRWG TGYDTELRTF VNIIATPKGG SHLTGFEQGL VKVVRKQVEA 
NARRLKISAK DGGERLEKDD ITAGLTAVVT VRLAEPQFEG QTKEVLGTAP VRAIVARTVE 
KQLGAILTST KRDDKAQASL LLDKVVAEMR ARVSARKQKE ISRRKNALET SSLPAKLADC 
RSDDVERSEL FIVEGDSALG TAKLARSSDF QALLPIRGKI LNVQKASISD MLRNAECAAI 
IQVLGAGSGR SFDLDAARYG KVVLMTDADV DGAHIRTLLL TLFYRYMRPL VEAGRVFAAV 
PPLHRIEVYG ARGKGNEYIY TYSEAELQAT LKRLDRAGKR YKDDIQRYKG LGEMDADQLA 
ETTMDPRHRT LRRVTAQHAE AAERVFELLM GSDVAPRKDF IISGAESLDR SRIDA