Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1968 |
Symbol | |
ID | 8649498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 2126742 |
End bp | 2128601 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003326545 |
Protein GI | 269956756 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.153822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGACA CCCAGCCGCC AGAGGCTTCC GACCAGATCC CCGAGCAGAC TCCCGAGAAG GCACCCGTCG GCGACCTCCT CAAGCCCGCA CGGATGGCCG TGCTGCTGCG CTTCCTGAAG CCGCACTGGC GCGTGATCAC GCTCGGCGCC GCCATCGGCA TGATCGCCAC GGTGGCGACC CTGTGGACGC CGCGCGTCGT CCAGGACGTC ATCGACGCGG TCATGTACGG CACGCCCGTC GCCGGGTACG TCACCACTCT CGCGATCCTC ACCGTCGTCG GCATCATCGC GAGCTGGCTG AGCTGGATCG TGCTGGGCCG CACCGCCGAG ACGGTCGTGT TCGACGTCCG GCGGTCCCTC GTGGAACGGT TCGTCCGCGG CCGCGTCCTG CAGGTCGCCG CGCGCCCCGC GGGCGAGCTC GTGTCGCGCA CCACCTCCGA CTCGCAGCTG CTGTCCGCAG CCGTGAGCTC GGGCTTCGTC TCCCTCGTCA ACGGCGCCAC CGGCATCATC GGCACCGTCA TCCTGATGGG CGTGATCGAC CCGGTCATGC TCGCCATCGC GCTCGGCGCC GTCGTCATCT TCGGCGGCAT CATGGCCGCG CTCATGCCCG CCGTGGGCCG GCATCGCGCC CGCGCCCAGG AGGCCATCGG CCACATGGGC GGCGAGCTCG AGGGCTCCGT GCGCGCCCTG CGCACGGTCA AGGTCGCGCG CGCCGAGCGC CGGCGCATCT CCGAGGTGCT CACCCACGCC GCGGACGCCC GGCGCCACGG CATCAAGGCG GTCCGGTCCG AGGCGATCGC CTGGACCTTC GCGTTCGGCG GCATCCAGGT AGCCATCGTC GTCATCGTCG CCCTGGGCGC CTGGCGCGTG TCGGCCGGTT ACCTGTCGAT CGCCGCGCTC GTCGCCTTCC TCATGTACAT CTTCAACTTC ATCGGCCCCG TGATGGAGTT CGCCGAGGCG CTCTCCTCGC TCCAGTCCGG GCTCGCGGCG TCCAAGCGCA TCATCGAGAT CGAGGAGATC GACACCGAGG CCGTCGACGA CGCGCCGCGA TCCATCGCCC CGTCGCCCTC CGCCGGCCCG GCGTCGGGCA CGACGGCGCC GCGCCCCGTG CTCGAGTTCG ACGACGTCAC CGCGCGCTAT ACCGACGACG GCGAGGACGT CGTCCAGAAC CTGTCGATCG CCATCCCGCG CACCGGGCAC ACGGCGTTCG TGGGCCCGTC GGGAGCAGGC AAGACGTCGG CGCTCTCGCT GGCGCTGCGG TTCCTGGAGC CCACCTCGGG CGAGATCCGC ATCGACGGTG TGCCGTTCCA GGAGCTGACT CCCGCGCAGG TGCGCTCCCG GTTCGCCTTC GTCGAGCAGG ACACCCCGGT CATCCCCGGC ACGATCCGCG ACAACCTGCT CATCGCGAAC CCCGACGCGA CCGAGGAGGC GATCGTCGAC GTCCTCGACG TCGTGCAGCT CACCGACCAG ATCGCGGCGC TGCCCGACGG GCTCGACACC TCGCTCGTGT CGTCGTCGGT GTCCGGCGGG CAGCGGCAGC GCATCGCGCT GGCCCGTGCG CTGCTCGCCC AGGCGGACGT GCTGCTCCTC GACGAGGCGA CCTCGCAGCT CGACGGCCGC ACAGAGTCCG CGATCCACTC CGCGATCACG GCGGCGGCGC AGCATGGGGC GGTCATCACG GTGGCACACC GCCTGTCGAC CGTCGTCGAC GCCGACCGCA TCGTCGTCAT GGACGAGGGC CGCGTGCGTG CGATGGGCAC CCACGCCGAG CTCCTCGCCA CGGACAGCCT GTACGCCGAG TTCGTCGAGG CGCTGACGAT CGACAGGCCC GCGGCCCCGC GGACCCTGGC GCCCGCGTGA
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Protein sequence | MSDTQPPEAS DQIPEQTPEK APVGDLLKPA RMAVLLRFLK PHWRVITLGA AIGMIATVAT LWTPRVVQDV IDAVMYGTPV AGYVTTLAIL TVVGIIASWL SWIVLGRTAE TVVFDVRRSL VERFVRGRVL QVAARPAGEL VSRTTSDSQL LSAAVSSGFV SLVNGATGII GTVILMGVID PVMLAIALGA VVIFGGIMAA LMPAVGRHRA RAQEAIGHMG GELEGSVRAL RTVKVARAER RRISEVLTHA ADARRHGIKA VRSEAIAWTF AFGGIQVAIV VIVALGAWRV SAGYLSIAAL VAFLMYIFNF IGPVMEFAEA LSSLQSGLAA SKRIIEIEEI DTEAVDDAPR SIAPSPSAGP ASGTTAPRPV LEFDDVTARY TDDGEDVVQN LSIAIPRTGH TAFVGPSGAG KTSALSLALR FLEPTSGEIR IDGVPFQELT PAQVRSRFAF VEQDTPVIPG TIRDNLLIAN PDATEEAIVD VLDVVQLTDQ IAALPDGLDT SLVSSSVSGG QRQRIALARA LLAQADVLLL DEATSQLDGR TESAIHSAIT AAAQHGAVIT VAHRLSTVVD ADRIVVMDEG RVRAMGTHAE LLATDSLYAE FVEALTIDRP AAPRTLAPA
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