| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1849 |
|---|
| Symbol | |
|---|
| ID | 8649373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 1994918 |
|---|
| End bp | 1995766 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003326427 |
|---|
| Protein GI | 269956638 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.176782 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCCCC GTGGCGCCTC CCCGTGGCGC CGTCTGCTGC GCCGTCCGAC GGCGGTGGTG
TCGCTCGCGT TCCTCGCCGT CGTCGTGACG GTGGCGGTGG GCGCGACGGT CCTCGGCGTC
GTCGACCCCA CGGCCCAGAA CCTGACGGCT GTCAACCAGC CGCCCGGGGG CGCGCACCTG
CTCGGCACCG ACGGGTTCGG CCGCGACCTG CTGGCCCGCC TGCTCGTGGG CGTGCGCGTC
TCGCTGACGA TCGCGTTCTT CGCCGGGCTG CTCGACCTCA CGATCGGTGT CACGTACGGG
CTGGTCGCGG GCCTGGCCGG GCCGCGCGTC GACGCGGCGA TGCAGCGCGC CCTCGAGGTG
CTGGGCGGCA TCCCCACGCT CGTCGTGCTC GTCCTCATGC TCATGGTGCT GCCGCCCGGG
ATGGTCTCGA TCGTCCTGGC CATGGCGCTG ACCGGCTGGA TCCCCATGGC GCGCCTGATG
CGCGCGCAGG CCCTGCGGCT CAAGGAGCAG GAGTTCATGC TCGCCGCGCG CGTGCTCGGT
GCGGGCCGAC CGCGGCTCGC GGTGCGCCAC CTGCTGCCCA ACAGCGTCGG CCTGATCGTG
GTGCAGACCA TGTTCACGAT CCCGACGGCG ATCTTCTTCG AGGCGTTCCT CAGCTTCATC
GGCCTCGGCC TGCGCCCGCC TGCCGCGTCG CTGGGCACGC TGCTGAGCAC GGGCTTCCAG
ACCATGACGT TCTTGCCGCA CCAGCTCCTC GTCCCCGCGA TCACCCTGTC GGCGATCATG
GTCGCGTTCA ACCTGCTGGC CGACGGCCTG CGCGACGCGT TCGACCCGCG GGGGGTGACC
CGCCGATGA
|
|---|
| Protein sequence | MRPRGASPWR RLLRRPTAVV SLAFLAVVVT VAVGATVLGV VDPTAQNLTA VNQPPGGAHL
LGTDGFGRDL LARLLVGVRV SLTIAFFAGL LDLTIGVTYG LVAGLAGPRV DAAMQRALEV
LGGIPTLVVL VLMLMVLPPG MVSIVLAMAL TGWIPMARLM RAQALRLKEQ EFMLAARVLG
AGRPRLAVRH LLPNSVGLIV VQTMFTIPTA IFFEAFLSFI GLGLRPPAAS LGTLLSTGFQ
TMTFLPHQLL VPAITLSAIM VAFNLLADGL RDAFDPRGVT RR
|
|---|
| |