Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1494 |
Symbol | |
ID | 8649016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 1620489 |
End bp | 1622276 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003326082 |
Protein GI | 269956293 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.648483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCACT CCACGATCGC CTCGACGTCG GACCTGGGCG TCGTCGCGAC CCTGCGCCGC GGCGTCCAGA TCAGCCCGCA GATCGTCCAG GGCATCGGCT GGACGCTGCT GCTCGCGGTG CTCGCCGCGG GCGGCCGCAT CGTCGTGCCG ATCACCGTCC AGGGCACGAT CGACGACGGC ATCCTGGCCG CCGGCGGGCC CGACGCCGGG CGCGTGGCCC TCATGGCCGC GCTCGCCGCC GCGGCCCTGC TGGTGGCCGG CACCTGCTCG TCCCTGGTCA ACCTGCGCCT CGTCTCGCGC ACCGAGGCGG GGCTCGCGTC GCTGCGCGTG CGCGCGTTCC GCCACGTGCA CGACCTGGCG ACGCTCACGC AGAGCACCGA GCGGCGCGGC TCGCTGGTCT CGCGCGTCAC CAACGACGTC GACACCATCT CGATGTTCGT CCAGTGGGGC GGCATCATGC TGCTCGTCTC CACGCTGCAG ATCGTCGTCG CGACCGTGCT CATGGTGACG TTCTCCTGGC AGCTCACCCT CGTGGTGTGG GCGTGCTTCG TGCCGCTGTT CCTGGTGATG CGGTACGGCC AGCGGTGGGT CGCAGCCCGC TACACGCAGG TGCGTGAGCG CGTCGGCGCC ATGCTCGGCG CGATTTCCGA GGCCGTCGTC GGCGCCGAGA CGGTGCGGGC CTACGGGATC GCCGCACGCA CGGGCGCCCG CATCGACCGG TCCATCGAGG ACACCCGTCA CGCGCAGGGC CGCGCCCAGG TGCTGGTGGC CACGACGTTC TCCAGCGGCA CGCTCATGTC CAACCTGGCG CTGGCCGTCG TCGTCGTGGT CGGCGCGCGG CTCGGCGTCG CGGGCGAGCT GACCGCCGGG CAGGTGGTCG CGTTCCTGTT CCTGGTCCAG CTCTTCACGG GCCCGGTGCA GATGGCCACC GAGATCCTCA ACGAGCTGCA GAACGCCGTC GCGGGCTGGC GGCGCGTGCT CGCCGTCATC GAGACGAAGG TCGAGGTCGC GCAGGCGCCC GACGCCGTCG ACTCGCCGCG CGGGCCCGCG CAGGTCTCGC TGCGTGGTGT GCGGTTCGCC TACCCGGGCG GCCCCGAGGT GCTGCACGGC GTCGACCTCG ACCTGCCCGC CCGGGCGCGC GTCGCCGTCG TCGGGCAGAC CGGGTCCGGC AAGACGACGA TCGCCAAGCT CGTCACGCGC CTCATGGACC CCACGGCGGG CACGGTGCTG CTCGACGGCG CGGACCTGCG CTCCCTGACC CTGTCCTCCC TGGGCGAGCG CGTGGTGCTG GTGCCGCAGG AGGGCTTCCT GTTCGACGGC ACGGTGCTCG CGAACGCGGC CTACGGGCTC CGCGACTCCG TGCCCGACGC GCGCGAGCGC GTGCTCGCCG CCTTCGCCGA GCTCGGCCTC ACCGGCTGGC TGGCCGACCT GCCCCAGGGC GTCGACACCC CGGTCGGGCA GCGTGGCGAG GCGCTGAGCG CGGGGGAGCG GCAGCTCGTC GCCATCGCCC GCGCCTACCT CGCCGCGCCC GACCTGCTCG TGCTCGACGA GGCCACGTCG GCCGTCGACC CGGCCACCGA GGTACGCATC GCCCGCGCGC TCGACTCGCT GACCGCGGGC CGCTCCACGA TCACCATCGC GCACCGCCTC TCGACCGCCG AGGCGAGCGA CCTCGTCGTC GTCGTCGACG CCGGGCACGT GGTGGAGGTG GGCACGCACG CCGAGCTCGC CGCCGCCGAC GGGGTCTACG CGCGGATGCA CGCCGCGTGG GTGGCCCAGA CGCGCTGA
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Protein sequence | MTHSTIASTS DLGVVATLRR GVQISPQIVQ GIGWTLLLAV LAAGGRIVVP ITVQGTIDDG ILAAGGPDAG RVALMAALAA AALLVAGTCS SLVNLRLVSR TEAGLASLRV RAFRHVHDLA TLTQSTERRG SLVSRVTNDV DTISMFVQWG GIMLLVSTLQ IVVATVLMVT FSWQLTLVVW ACFVPLFLVM RYGQRWVAAR YTQVRERVGA MLGAISEAVV GAETVRAYGI AARTGARIDR SIEDTRHAQG RAQVLVATTF SSGTLMSNLA LAVVVVVGAR LGVAGELTAG QVVAFLFLVQ LFTGPVQMAT EILNELQNAV AGWRRVLAVI ETKVEVAQAP DAVDSPRGPA QVSLRGVRFA YPGGPEVLHG VDLDLPARAR VAVVGQTGSG KTTIAKLVTR LMDPTAGTVL LDGADLRSLT LSSLGERVVL VPQEGFLFDG TVLANAAYGL RDSVPDARER VLAAFAELGL TGWLADLPQG VDTPVGQRGE ALSAGERQLV AIARAYLAAP DLLVLDEATS AVDPATEVRI ARALDSLTAG RSTITIAHRL STAEASDLVV VVDAGHVVEV GTHAELAAAD GVYARMHAAW VAQTR
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