Gene Xcel_1424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_1424 
Symbol 
ID8648945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand+ 
Start bp1545898 
End bp1546581 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content72% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003326013 
Protein GI269956224 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.962771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTGC TGATCGTCGA GGACGAACCC GAACTCGCCG AGGCCGTGCG CGACGGCCTG 
CGTCTGGCGG CGATCGCCGC CGACGTCGCC GGCGACGGCG AGACCGCACT GGAGCTGCTG 
GCCGTCAACG CGTACGACAT CGCCATCCTG GACCGTGACA TCCCCGGCCC CTCGGGCGAC 
GAGATCGCGA AGCGCGTCGT GGCCTCCGGC AGCGGCACGC CGATTCTCAT GCTCACCGCT 
GCCGACCGGA TCGACGACAA GGCCTCCGGG TTCGAGCTCG GCGCCGACGA CTACCTCACC 
AAGCCCTTCG AGCTGCGCGA GCTCGTCCTG CGGCTGCGGG CGCTCGATCG CCGACGCGCT 
CACCACCGGC CGCCTGTCCA GGAGATCGCG GGCCTGCGCC TCGACCCGTT CCGCCGTGAG 
GTGTACCGCG ACGGCCGGTA CGTCGCGCTC ACCCGCAAGC AGTTCGCCGT GCTCGAAGTC 
CTCGTCGCGG CGCAGGGCGG AGTGGTGAGC GCCGAGGAGC TCCTGGAGCG GGCGTGGGAC 
GAGAACGCCG ACCCCTTCAC CAACGCCGTG CGCATCACCG TCTCCGCACT GCGCAAACGG 
CTCGGGGAGC CCTGGCTGAT CGCGACCGTG GCCGGCGTCG GCTACCGGAT CGACACCGGC 
CCCGCCGGCG AGCGCCGTGG ATAG
 
Protein sequence
MRVLIVEDEP ELAEAVRDGL RLAAIAADVA GDGETALELL AVNAYDIAIL DRDIPGPSGD 
EIAKRVVASG SGTPILMLTA ADRIDDKASG FELGADDYLT KPFELRELVL RLRALDRRRA 
HHRPPVQEIA GLRLDPFRRE VYRDGRYVAL TRKQFAVLEV LVAAQGGVVS AEELLERAWD 
ENADPFTNAV RITVSALRKR LGEPWLIATV AGVGYRIDTG PAGERRG