Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1333 |
Symbol | |
ID | 8648851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 1446681 |
End bp | 1448135 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | argininosuccinate lyase |
Protein accession | YP_003325922 |
Protein GI | 269956133 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.279434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCGAGA TCGAGAAGCA CGACGCCGGT GAGGCGACCC AGCCCACCCA GCCCGCGGTG GCGCTGTGGG GCGGCCGGTT CGCGGGCGGC CCCTCGCCCG AGCTGCAGGC GCTGTCCCAG TCGACCCACT TCGACTGGAA GCTCGCGGCC TACGACGTCC GCGGATCGCA GGCCCACGCC AAGGTGCTGC ACCGTGCAGG CCTGCTGTCC GACGACGAGC TCGAGGCGAT GGCCGCCGCC CTCGACCGGC TCGCCGCCGA CGTCGCAGCG GGCACCTTCC TGCCGGCGCT CGACGACGAG GACGTCCACA CCGCACTCGA ACGCGGCCTG ATCGAGCGCG CCGGGACCGA GCTGGGCGGC AAGCTCCGCG CCGGCCGCTC GCGCAACGAC CAGATCGCCA CCCTGGTGCG CCTCTACCTG CGCGAGCAGG CCCGCACCAT CGCCGCCCAG GTCCTCGCCG TCGTCGACGA GATCATCACC CAGGCCGACG CTGCGGGCAC CGCCGTCATG CCGGGCCGCA CCCACCTCCA GCACGCCCAG CCGGTCCTGC TCGCCCACCA CCTGCTCGCG CACGCCTGGC CGCTCCTGCG CGACGTCGAC CGCTTCATCG ACTGGGACGT GCGCGCCGCC CGCAGCCCGT ATGGGTCCGG GGCGCTCGCG GGTTCCTCGC TGGGCCTCGA CCCGGCCGCC GTGGCCGCGG ACCTGGGCTT CGACGGCCCG GTCGAGAACT CGATCGACGG CACCGCCGCG CGCGACGTCG TCGCGGAGTT CGCGTTCGTC GCGGCGATGA TCGGCGTCGA CCTGTCGCGC TTCGCGGAGG AGATCATCCT CTGGAACACC AAGGAGTTCG GCTTCGTCCG CCTGGACGAC TCGTACTCCA CCGGCTCGAG CATCATGCCG CAGAAGAAGA ACCCGGACAT CGCCGAGCTC GCGCGCGGCA AGGCGGGCCG CCTCCTCGGC GACCTGACGG GCCTCCTGGC CACCCTCAAG GGCCTCCCGC TCGCCTACAA CCGCGACCTG CAGGAGGACA AGGAGCCCGT CTTCGACCAG GTGGCCACGC TCACCGTCCT GCTGCCGGCC TTCGCCGGGA TGGTCCGCAC GATGGTGTTC GACACCGAGC GGATGGCGGC GCTCGCCCCC CAGGGCTTCT CGCTCGCGAC GGACATCGCG GAGTGGCTCG TGCGCGAGGG CGTGCCGTTC CGCGTCGCGC ACGAGGTCGC CGGCGCGTGC GTGCGGGTGT GCGAGGAGCG CGGCATCGAG CTGTGGGACC TGACCGACGC GGAGCTGGCC TCGATCAGCG AGCACCTGAC GCCGCAGGTG CGCGCTGTGC TCTCCGTCGA GGGCTCGGTC GCGTCGCGCG ACGCCGTCGG CGGCACCGCC CCGGCTCGCG TCGCCGAGCA GCTCGAGGCG GCCAAGGAGC GCGCGACCGA GTACCGCTTC TGGGCCGAGT CGTGA
|
Protein sequence | MPEIEKHDAG EATQPTQPAV ALWGGRFAGG PSPELQALSQ STHFDWKLAA YDVRGSQAHA KVLHRAGLLS DDELEAMAAA LDRLAADVAA GTFLPALDDE DVHTALERGL IERAGTELGG KLRAGRSRND QIATLVRLYL REQARTIAAQ VLAVVDEIIT QADAAGTAVM PGRTHLQHAQ PVLLAHHLLA HAWPLLRDVD RFIDWDVRAA RSPYGSGALA GSSLGLDPAA VAADLGFDGP VENSIDGTAA RDVVAEFAFV AAMIGVDLSR FAEEIILWNT KEFGFVRLDD SYSTGSSIMP QKKNPDIAEL ARGKAGRLLG DLTGLLATLK GLPLAYNRDL QEDKEPVFDQ VATLTVLLPA FAGMVRTMVF DTERMAALAP QGFSLATDIA EWLVREGVPF RVAHEVAGAC VRVCEERGIE LWDLTDAELA SISEHLTPQV RAVLSVEGSV ASRDAVGGTA PARVAEQLEA AKERATEYRF WAES
|
| |