Gene Xcel_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_1080 
Symbol 
ID8648594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand- 
Start bp1161313 
End bp1161936 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content75% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003325669 
Protein GI269955880 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.311538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCGACA ACGCCGACCT GCTCGCCCTG CGCACCTGGC AGCACGCGCT GCTCACGCTC 
CAGGCCGTCG CGATCGCCGC CGCGGTCGCG GTGCCGCTCG CGCTCCTCGT GGTCCGACGA 
CGACGCCTCG CCGCGGGGAT CGTCGGCGTC GCCGCCGTCC TCTACACGGT GCCGTCGCTC 
GCCCTGTTCG CGATCCTCGC CCCCGTCCTC GGCATCGGAC GCACCCCCGT GCTCGTCGGG 
CTCGTCGCCT ACGCGCTGCT CGTGCTGCTG CGCCAGACGC TCGCCGGGCT CCAGTCCGTC 
GACCCCGCGA CCCTCGACGC CGCCCGCGGC GTCGGGTACG GGCCCACCCA GGTCACCGTG 
CTCGTCCGGC TCCCCGCAGC CCTGCCCGCC GTCGTCTCCG GGCTGCGCCT GGCCACCGTG 
TCCACCGTCG CCCTGGCCAC CGTCGGCGTC ATCGTCGGCT ACGGCGGGCT CGGACAGCTC 
ATGTTCGAGG GGTTCACCAA CAACTTCTAC CGGGCCGAGA TCAGCGCCGC CACGCTCGCC 
TGCCTGCTCC TCGCGTTCGT CCTCGACGTC GCCCTGTGGG CCACCGGCCG CCTCCTGACC 
CCCTGGGCGC GGAGGCCCGC ATGA
 
Protein sequence
MVDNADLLAL RTWQHALLTL QAVAIAAAVA VPLALLVVRR RRLAAGIVGV AAVLYTVPSL 
ALFAILAPVL GIGRTPVLVG LVAYALLVLL RQTLAGLQSV DPATLDAARG VGYGPTQVTV 
LVRLPAALPA VVSGLRLATV STVALATVGV IVGYGGLGQL MFEGFTNNFY RAEISAATLA 
CLLLAFVLDV ALWATGRLLT PWARRPA