Gene Xcel_0963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_0963 
Symbol 
ID8648473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp1040315 
End bp1041541 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content78% 
IMG OID 
ProductLmbE family protein 
Protein accessionYP_003325552 
Protein GI269955763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.871469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGGG ACGACGTCGT GCGCACGACG TCGTCCCCCG TCGTCGTGTC CGCGTCGCGT 
CCCCGGCCGC AGCGGCTCGC TCGGGGGGTG CTGGCGGTGC ACGCACATCC CGACGACGAG
ACGCTGTCGA CCGGGGCGCT GCTCGCGACC TGCGCGGCGT GGGGGGTGCC CGCCCTCGTC
GTGACGTGCA CCCGCGGTGA GCGCGGGGAG GTTCTCGCGC TCCCGGGCAC GACGTCGGAA
GGCCTCGCCC ACCTCGAGGG TGACGGCCCG GCGCTCGCCG CCCACCGCGA GCGCGAGCTC
GCCGCAGCCC TCACCGCGCT CGGCGGCGGC ACCCCGGCCG CGATCACCCA CTGCTACCTG
GACACGGAGG CCCTCGCGTC GCCCGCGTCG CCCGCGTCCC CCGCAGAGTT GTCAGGCGGT
GGCGGGTCCA TAGCCCTGCG TGCCTCTGAC AGGTCCGAGA GGTTCGAGGA CTCCGGGATG
GTGTGGGTCG CCCCGGGCGT GGCCGGTCCC GATCCGGCCG TGCCGGCCGG GTTCGCCGTC
GTACCGCTCG ACGACGCCGC CGGGCGCCTG GCGCGCCTGA TCCGGGAGGT GCGCCCGTCG
GTCGTCGCGA CGTACGAGGC CGGCGGCGGG TACGGGCACC CCGACCACGT CCGGGCGCAC
CAGGTCGCCG CGCGCGCCGT CGCGCTCGCC GCAGACCCCG CGTTCGACGT CGCGGCCGCC
GACACCGCCG ACGACGCAAC GGTTCCCGAC GACGCAGCGA CGCCCGACGA CGTCACGGTT
CCCGACGGCG CAGCCGGGCG CGGCCGCGCG CTCGTGCCCT GGGCGGCCGA GCTGTGGGTC
CGGGTCGCGG CGGCCGGCGA GCTGCGCCGG GAGCGGGCCG CGCTGGCCGG GCATCCCGGG
GCGCGGGCGC TCGCGGACGC GACCGGGCTG ACGTTCCCCG CCGCGGAGGA GGCGTTGCCC
CCCGTCGCGC GCGACGACGC GGCGATCGCG GCCCTTGCCG TCGCCGGTCG GGTCGTCGAG
GTCGACGTGG CGCCCGTGCT CGGCGACGTC GTCGCGGCAC TGCGGGCGCA CGCCACCCAG
GTGCAGCACG CCCGGGCGCT CGACCCGTCG CGCGACCAGA GTCCGGACCG ACGGCTGCTG
GGGTGGTACG CGCTGTCCAA CGGCGTGCTG GCCCCGATCG GGCGGGCGGA GACGTATCAG
GTGGTCGTCG CGGCCGAGGC CCCGTGA
 
Protein sequence
MTGDDVVRTT SSPVVVSASR PRPQRLARGV LAVHAHPDDE TLSTGALLAT CAAWGVPALV 
VTCTRGERGE VLALPGTTSE GLAHLEGDGP ALAAHREREL AAALTALGGG TPAAITHCYL
DTEALASPAS PASPAELSGG GGSIALRASD RSERFEDSGM VWVAPGVAGP DPAVPAGFAV
VPLDDAAGRL ARLIREVRPS VVATYEAGGG YGHPDHVRAH QVAARAVALA ADPAFDVAAA
DTADDATVPD DAATPDDVTV PDGAAGRGRA LVPWAAELWV RVAAAGELRR ERAALAGHPG
ARALADATGL TFPAAEEALP PVARDDAAIA ALAVAGRVVE VDVAPVLGDV VAALRAHATQ
VQHARALDPS RDQSPDRRLL GWYALSNGVL APIGRAETYQ VVVAAEAP