Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_0963 |
Symbol | |
ID | 8648473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 1040315 |
End bp | 1041541 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | LmbE family protein |
Protein accession | YP_003325552 |
Protein GI | 269955763 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.871469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGGGG ACGACGTCGT GCGCACGACG TCGTCCCCCG TCGTCGTGTC CGCGTCGCGT CCCCGGCCGC AGCGGCTCGC TCGGGGGGTG CTGGCGGTGC ACGCACATCC CGACGACGAG ACGCTGTCGA CCGGGGCGCT GCTCGCGACC TGCGCGGCGT GGGGGGTGCC CGCCCTCGTC GTGACGTGCA CCCGCGGTGA GCGCGGGGAG GTTCTCGCGC TCCCGGGCAC GACGTCGGAA GGCCTCGCCC ACCTCGAGGG TGACGGCCCG GCGCTCGCCG CCCACCGCGA GCGCGAGCTC GCCGCAGCCC TCACCGCGCT CGGCGGCGGC ACCCCGGCCG CGATCACCCA CTGCTACCTG GACACGGAGG CCCTCGCGTC GCCCGCGTCG CCCGCGTCCC CCGCAGAGTT GTCAGGCGGT GGCGGGTCCA TAGCCCTGCG TGCCTCTGAC AGGTCCGAGA GGTTCGAGGA CTCCGGGATG GTGTGGGTCG CCCCGGGCGT GGCCGGTCCC GATCCGGCCG TGCCGGCCGG GTTCGCCGTC GTACCGCTCG ACGACGCCGC CGGGCGCCTG GCGCGCCTGA TCCGGGAGGT GCGCCCGTCG GTCGTCGCGA CGTACGAGGC CGGCGGCGGG TACGGGCACC CCGACCACGT CCGGGCGCAC CAGGTCGCCG CGCGCGCCGT CGCGCTCGCC GCAGACCCCG CGTTCGACGT CGCGGCCGCC GACACCGCCG ACGACGCAAC GGTTCCCGAC GACGCAGCGA CGCCCGACGA CGTCACGGTT CCCGACGGCG CAGCCGGGCG CGGCCGCGCG CTCGTGCCCT GGGCGGCCGA GCTGTGGGTC CGGGTCGCGG CGGCCGGCGA GCTGCGCCGG GAGCGGGCCG CGCTGGCCGG GCATCCCGGG GCGCGGGCGC TCGCGGACGC GACCGGGCTG ACGTTCCCCG CCGCGGAGGA GGCGTTGCCC CCCGTCGCGC GCGACGACGC GGCGATCGCG GCCCTTGCCG TCGCCGGTCG GGTCGTCGAG GTCGACGTGG CGCCCGTGCT CGGCGACGTC GTCGCGGCAC TGCGGGCGCA CGCCACCCAG GTGCAGCACG CCCGGGCGCT CGACCCGTCG CGCGACCAGA GTCCGGACCG ACGGCTGCTG GGGTGGTACG CGCTGTCCAA CGGCGTGCTG GCCCCGATCG GGCGGGCGGA GACGTATCAG GTGGTCGTCG CGGCCGAGGC CCCGTGA
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Protein sequence | MTGDDVVRTT SSPVVVSASR PRPQRLARGV LAVHAHPDDE TLSTGALLAT CAAWGVPALV VTCTRGERGE VLALPGTTSE GLAHLEGDGP ALAAHREREL AAALTALGGG TPAAITHCYL DTEALASPAS PASPAELSGG GGSIALRASD RSERFEDSGM VWVAPGVAGP DPAVPAGFAV VPLDDAAGRL ARLIREVRPS VVATYEAGGG YGHPDHVRAH QVAARAVALA ADPAFDVAAA DTADDATVPD DAATPDDVTV PDGAAGRGRA LVPWAAELWV RVAAAGELRR ERAALAGHPG ARALADATGL TFPAAEEALP PVARDDAAIA ALAVAGRVVE VDVAPVLGDV VAALRAHATQ VQHARALDPS RDQSPDRRLL GWYALSNGVL APIGRAETYQ VVVAAEAP
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