Gene Xcel_0458 details

Gene Information

• Locus tag: Xcel_0458
• ID: 8647961
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: +
• Start bp: 534164
• End bp: 536200
• Gene Length: 2037 bp
• Protein Length: 678 aa
• Translation table: 11
• GC content: 78%
• Product: thiamine pyrophosphate protein TPP binding domain protein
• Protein accession: YP_003325055
• Protein GI: 269955266

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGGCC GCGCAGCCGA GCCCTCGGCG ACGTCCGCCG CGATCGGCGC CGCGCGGGCC 
CTGGTGGCTG AGCTGCGCAT GCAGGGCGTG CGGGACGTCG TCCTCGCGCC GGGGTCGCGC 
TCCGCGCCGC TCGCCTACGC GCTCGCCCAG GCCGCCGACG CCGGAGAGCT CACGCTCCAC 
GTCCGCGTCG ACGAGCGCGC GGCCGGTTTC CTCGCGCTCG GTCTGGCGCG CGGCACGGCG 
CTGCCCGCCC ACCTTTGGGG GGCCGCGCGG CCCGTCGCCG TCGTCACCAC CTCGGGCACC 
GCCGTCGCGA ACCTGCACCC CGCCGTCCTG GAGGCGCACC ACACGGGGGT GCCGCTCCTG 
CTGCTGACCG CCGACCGGCC GCACGAGCTG CGCGGCACCG GCGCCTCGCA GACCACCGAC 
CACGTCGGCA TCTTCGGCAC CGCGGTGCGC TTCGCCGCCG ACGTCCCCGC ACCCGACGGC 
CGTGACGGCG AGGTCCGGGA CCTGCTCGCG ACGGCCGGCC GGGCGCTCGC GGCGGCCCTC 
GGGCTGCGCG ACCGCAACCC CGGGCCGGTC CACCTCAACC TCGCGTACCG CGAGCCGCTG 
CACCCGACCG GGCCCGCGCT GCCGGGCGTC GAGCTGTCAG GTGCTGCGAG CGCCTCGGCA 
CCCCCTGGCA CTGACATCAC AACGAGCGCG GCGGGCGTGT CAGGGGCGGG GAGGGCTCCG 
GCGCGCCGTG ACCCTGACAA GCCTGGTGAC CCTGACAAGC CCGGTGACCC TGACAGGCCC 
GGTGGCTCCG ACGGCGCCGC CCAGGAAGTG GGGCCGGGGT CCGACGGGTT CCGGCGGGCC 
GTCGTCGTGC CGCCCGCGCC CGGGCCCGGC TCCGACCCCG CGCTGTACGG CGACCCCGCC 
CGCACGCTCG TCGTCGCGGG CGACGGCGCC GGGCCGGCCG CCCGGGCGCT CGCTGAGGCG 
CAGGGGTGGC CGCTGCTCGC CGAACCGTCG TCGGGCGCGT GCGGGGGACC GAACGCCGTG 
CGCGCCTACC GGTCGCTGCT CGGCGTCGCC GAGCTGAGCG GGGAGGTCGA GCACGTCGTC 
GTGCTGGGCC GCCCGACGCT CTCGCGTCCC GTCCAGCGGC TGCTCGCTCG GCCCGACGTC 
GTCGTCACCG TCGTCGCGCC GGGCGGGGCA CCCTGGCCCG ACGCCGCCCG CAACGCCGAG 
CGCGTGGTCG ATGCGCTGCA CGAGCGCTGG TTCACCCCGG CGCCGGGGGA GCGGACGTTC 
CTGGACCGCT GGCTCGCCGC GTCGCAGGCA GCCGCCGACG TCGTCGTCGC GGCGACGGCG 
CCCGGCGCGA GCCCTGACGT CGACGATGCA GCGGCTCGCC CCGCCGCGCG GTTCGACGCG 
GAGCCGTTCG CGGCGCTCGC CGTCGCCCGC GCGGTGGCCG CGGCCACCGG GCCCGACGAC 
GTCCTCGTCG TCGGCTCCTC CAGCCCGGTG CGCGACCTCG ACCTGGTGCT GGGGCTGGAC 
GGCGAGCCCG GCATCGTGCT CGCCAACCGT GGTCTGGCCG GGATCGACGG CACCGTGTCC 
ACCGCGTACG GCGTCGCGCT CGCTGCGGCC CGGCAGGGGC GGCGGACCCG CGCCCTGATG 
GGCGACCTCA CCTTCCTGCA CGACGTCGGC GGGCTGCTGC GCGGACCGCT CGAACCGGCA 
GCCGACCTCC AGCTCGTCGT GGTGAACGAC GACGGCGGGT CCATCTTCGC GACCCTCGAG 
CACGGGGAGC TCGCCGCCGC CTCGGAAGCG GGCAGCCGCA CGTTCGAGCG GATCTTCGGC 
ACCCCGCACG GCGTCGACCT GGGGCCGCTG TGCGCTGGCT ATGGCGTCGC GCACCGGCTG 
GTCGGCGACG TCGACGGGCT CCGCGAGGCC CTCGCCGCAC CGGCATCCGG CACGGAGGTC 
GTCGAGGTGC GGGTGCCGCG TCGTGACAGG CTGGTAGAGG CGCGTGCGCT GCACCAGGCG 
ATCGTCGCGG CGGCGCGCGT CGCCCCGGCC GCCGCGCAGG GCGCGCCAGC GAACTGA 

 

Protein sequence

MSGRAAEPSA TSAAIGAARA LVAELRMQGV RDVVLAPGSR SAPLAYALAQ AADAGELTLH 
VRVDERAAGF LALGLARGTA LPAHLWGAAR PVAVVTTSGT AVANLHPAVL EAHHTGVPLL 
LLTADRPHEL RGTGASQTTD HVGIFGTAVR FAADVPAPDG RDGEVRDLLA TAGRALAAAL 
GLRDRNPGPV HLNLAYREPL HPTGPALPGV ELSGAASASA PPGTDITTSA AGVSGAGRAP 
ARRDPDKPGD PDKPGDPDRP GGSDGAAQEV GPGSDGFRRA VVVPPAPGPG SDPALYGDPA 
RTLVVAGDGA GPAARALAEA QGWPLLAEPS SGACGGPNAV RAYRSLLGVA ELSGEVEHVV 
VLGRPTLSRP VQRLLARPDV VVTVVAPGGA PWPDAARNAE RVVDALHERW FTPAPGERTF 
LDRWLAASQA AADVVVAATA PGASPDVDDA AARPAARFDA EPFAALAVAR AVAAATGPDD 
VLVVGSSSPV RDLDLVLGLD GEPGIVLANR GLAGIDGTVS TAYGVALAAA RQGRRTRALM 
GDLTFLHDVG GLLRGPLEPA ADLQLVVVND DGGSIFATLE HGELAAASEA GSRTFERIFG 
TPHGVDLGPL CAGYGVAHRL VGDVDGLREA LAAPASGTEV VEVRVPRRDR LVEARALHQA 
IVAAARVAPA AAQGAPAN