| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0423 |
|---|
| Symbol | |
|---|
| ID | 8647926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 496465 |
|---|
| End bp | 497358 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003325020 |
|---|
| Protein GI | 269955231 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.283538 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCCC CGCCCGCTCC CGCGCCACCC GCGCGCCCAC CGCGTACCGA CGGCGTCCCC
GCCGACGGGT CGGTCCGCGT CGGCGTCGAC GACCGGTTCC ACCGGGCACC GTCTCGGCCC
GCCGGGCTCC AGCGGGTGAC GCAGGTCGCC GGCCGCGCCA TCGGTCCGCT GTTCGTGCTC
GCACTGTGGT GGGTCGCCTC CGCGCAGGCG TGGGTCTCGC CCATCCTGCT CCCGGCGCCC
GGCACGGTCT GGGCCGCCGC CGTCGACCTC GTCAGCTCCG GCAAGCTCCA GGACAACCTG
GGCGTGTCGC TCGGCCGAGC CATGACCGGC CTGGGGATCG GCCTCGTCGT CGGGGTCACG
CTCGCGCTGC TCACCGGCCT GTCCAAGGTG GCCGAGCTGC TCGTCGACTC CAACGTCCAG
ATGGTGCGGT CGATGCCGAT CCTGGCGCTG CAGCCGCTGG TCATCGTCTG GTTCGGCATC
GGCGAGCCCA CCAAGATCCT GCTGGTCGCC CTCGCGGTCA CCTTCCCCGT GTACATCAAC
ACCCACGCCG CGATCCGCGC CGTCGACGCG CGCTTCGTCG AGCTCGCCAC CACCCGCGGC
CTCGGTCGGC TCGCCCTCGT CCGCCACGTC GTGCTGCCCG GCGCGCTGCC CGGCTTCCTC
ACCGGTCTGC GGTTCGCGAC GTCGATCTCC TGGCTCGTCC TCGTCGTCGC CGAGCAGATC
AACGCCACCG CCGGCATCGG GTACCTCATG ACCCAGGCCC GCACCGTCGC ACGCACCGAC
GTGATCATCG TCGGGCTGGT CGTCTACGCG CTGCTCGGCC TGCTCTCCGA CACCATCGTC
CGGCTCGTCC AGAGGAAGGC ACTGTCATGG TCATCGACGC TCCAGGCACG CTGA
|
|---|
| Protein sequence | MSAPPAPAPP ARPPRTDGVP ADGSVRVGVD DRFHRAPSRP AGLQRVTQVA GRAIGPLFVL
ALWWVASAQA WVSPILLPAP GTVWAAAVDL VSSGKLQDNL GVSLGRAMTG LGIGLVVGVT
LALLTGLSKV AELLVDSNVQ MVRSMPILAL QPLVIVWFGI GEPTKILLVA LAVTFPVYIN
THAAIRAVDA RFVELATTRG LGRLALVRHV VLPGALPGFL TGLRFATSIS WLVLVVAEQI
NATAGIGYLM TQARTVARTD VIIVGLVVYA LLGLLSDTIV RLVQRKALSW SSTLQAR
|
|---|
| |