| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0210 |
|---|
| Symbol | |
|---|
| ID | 8647709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 249709 |
|---|
| End bp | 252066 |
|---|
| Gene Length | 2358 bp |
|---|
| Protein Length | 785 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003324807 |
|---|
| Protein GI | 269955018 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.926973 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGGCA TGGCTGCCCC CGCCCCCGGC ACCGTCCCCG GCCCGACGAC GACGCCCGTG
CCCGACGCCG CGCGCATCGC CGGCAGCCCC GACCAACCGG TGCTGCGCCG CATCGCCACC
CTGCTCGCGC CGTACCGGGC GCAGCTGCTG CTCGTCGGCC TCGCCGTCAT CGTCAGCGCA
AGCCTGACGA GCGTCGCCCC GTTCCTCACC CGGGCCGTGT TCGACGACGC GCTGTTCCCC
GCCGGGCCTG ACGGCGTCGT CGGGCCGCCC GACCTGGACC TGCTGTACTG GCTGATCGGC
GGCCTGGTCG CCATCCCGCT CGTCAGCGCG CTCATCGGCG TCGGGCAGAC GTACCTGACC
ACCCGCATCG GCAACGGGGC CATGGCGGAC CTGCGGGTCG CGCTGTTCGC GCACCTGGAG
AAGATGGAGC TCGCGTTCTT CACGAGCACG CGCACGGGGG ACATCCAGTC GCGGCTGGCG
AACGACGTCG GCGGAGTCAA GAACGTGCTC ACCAGCACCG CGACGACGAT CCTCCAGAAC
GTCGTCACGG TGATCGCGGC GTTCGTGGCC ATGGTGCTGC TGAGCTGGCA GCTCACCATC
ATCACGCTGG TGCTGATGCC GGTGTTCATG GTCATCCAGG TCCGGGTCGG CAAGCGGCGC
AAGGTGCTGC AGAGGCGCAC GCAGGAGTCG TTGTCGGAGA TGACGGCGAT CACCGAGGAG
TCCCTCGGCG TGTCCGGGGT GCTGCTCGCG AAGGTGTTCA ACCGCACCGA CGTCGAGGTG
GAGCGGTACC GGCGCGAGAA CCGCCGCCAG ACCCGGCTGC AGGTCAAGAA CGCCATGACC
GGCCAGACGT TCTTCTCGAT CGTCTCGACG TTCTTCGGCC TGACGCCGGC GATCGTCTAC
CTGGTGGCCG GCCTGCTCAT CAACGGCGGC ACGCTCGTGG GCGGGGCCGT GCTGAGCGCC
GGCACGATCA TCGCGTTCAC CACGCTCCAG GCGCGGCTCC AGCAGCCGCT CGTGCAGCTC
ATGCGCGTGA CCCTCGACAT CCAGACGTCG TTCGCGCTGT TCGCGCGACT CTTCGAGTAC
CTCGACCTCG AACCGGCCAT CCGGGACCGC CCCGGCGCGC GCGTGCTCGG CAAGGACGAG
GTGCGTGGCG ACGTCGAGCT CCGCGAGGTG TGGTTCCGCT ACCCGTCGAC GCGCGCGGCC
TCCGCCCCCG CCGGGTCCGC TCCGAGGCCC GACGGCGGTG GCGGTCGTGG GCGCGGCGGC
GGTGGCGGGC GCGGCGCGCG GGGGCGTTCC GGCCGCGGCT ACCGGGCCCT GGAGGTGCCC
GTCGTCGCTG CCATCACCGA CGCCGCGGGG GCCAACGTGC TGCCGCCGTC GTCGGCGCCC
GGGCTGGCGG CGGCGGTCCC GGTGGACGAC CCGCTCCCGG TCCCCGCGCC GCACCCGGTG
GTTGAGCTTG TCGAATCCAC CCAGACGTCG GACGGAAGGG TGGTTTCGAC AGGCTCAACC
ACCGGGGACC GTGGGGTGGT TTCGACGGGC TCAACCACCG AGGGCGGCTC AACCACCGGG
GGTGGCCTCC CCGACGACGA GAAGTGGGCG CTCGCGGACC TCTCGCTGAC GGTGCGGGCG
GGGCAGCTCG CCGCGCTCGT GGGCCCGTCC GGTTCGGGCA AGACGACGCT GACGTACCTG
GTGCCGCGCC TGCACGAGGT GACGCGCGGG GCGGTGCTCG TCGACGGGGT GGACGTGCGG
GACATGACCC TGGGAAGCCT CGCCGACGTC GTCGGCATGG TGACGCAGGA GCCCTACATG
TTCCACGGCA CGATCACGGA GAACCTGCGG TACGCACGGG CCGACGCGAC CGACGCGGAG
ATCGTCGAGG CGTGCCGCGC GGCCAACATC CACGACCGCA TCATGAGCTT CGCCGACGGG
TACGAGACCA TCACCGGGGA GCGCGGCTTC CGGCTCTCCG GCGGGGAGAA GCAGCGCCTG
TCGATCGCGC GCGTGCTCAT CAAGGACCCG AAGATCCTCA TCCTGGACGA GGCGACGTCG
GCCCTCGACA CCGCGACCGA GCGGCTGGTG CAGGAGGCGC TGGAGCGGGC CATGGCCGAC
CGGACGACGT TCGCGATCGC GCACCGGCTG TCCACGATCA TGAACGCCGA CGTCATCTTC
GGGATCGCGG ACGGGCGGCT CGTCGAGCAG GGCACCCATG CCGAGCTGCT GGAACGCGGC
GGCCTGTACG CGCGGCTCTA CGCCGAGCAG TTCGGGGGCG GGCAGGTCGA GGCGCGCCTC
GCGGACGCGG TGCGGTTCAC CGACGGATCA CTTCTCGCCG AGGCGTGGGG GCACCCGAAG
CCCGACGTGC CGGTCTGA
|
|---|
| Protein sequence | MGGMAAPAPG TVPGPTTTPV PDAARIAGSP DQPVLRRIAT LLAPYRAQLL LVGLAVIVSA
SLTSVAPFLT RAVFDDALFP AGPDGVVGPP DLDLLYWLIG GLVAIPLVSA LIGVGQTYLT
TRIGNGAMAD LRVALFAHLE KMELAFFTST RTGDIQSRLA NDVGGVKNVL TSTATTILQN
VVTVIAAFVA MVLLSWQLTI ITLVLMPVFM VIQVRVGKRR KVLQRRTQES LSEMTAITEE
SLGVSGVLLA KVFNRTDVEV ERYRRENRRQ TRLQVKNAMT GQTFFSIVST FFGLTPAIVY
LVAGLLINGG TLVGGAVLSA GTIIAFTTLQ ARLQQPLVQL MRVTLDIQTS FALFARLFEY
LDLEPAIRDR PGARVLGKDE VRGDVELREV WFRYPSTRAA SAPAGSAPRP DGGGGRGRGG
GGGRGARGRS GRGYRALEVP VVAAITDAAG ANVLPPSSAP GLAAAVPVDD PLPVPAPHPV
VELVESTQTS DGRVVSTGST TGDRGVVSTG STTEGGSTTG GGLPDDEKWA LADLSLTVRA
GQLAALVGPS GSGKTTLTYL VPRLHEVTRG AVLVDGVDVR DMTLGSLADV VGMVTQEPYM
FHGTITENLR YARADATDAE IVEACRAANI HDRIMSFADG YETITGERGF RLSGGEKQRL
SIARVLIKDP KILILDEATS ALDTATERLV QEALERAMAD RTTFAIAHRL STIMNADVIF
GIADGRLVEQ GTHAELLERG GLYARLYAEQ FGGGQVEARL ADAVRFTDGS LLAEAWGHPK
PDVPV
|
|---|
| |