Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_0109 |
Symbol | |
ID | 8647604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 117323 |
End bp | 119671 |
Gene Length | 2349 bp |
Protein Length | 782 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | Oligopeptidase B |
Protein accession | YP_003324708 |
Protein GI | 269954919 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCACGACG CCCCGCCTGT CACCACGACG CCCGACGACG ACGCCCCGGC CGCGCCGCCC CTGACCCCCC GGCGACCCAC CCCGCGCACC CACCACGGCG ACGTCGTCAT CGACGACTAC GAGTGGCTGC GCGACGCCGA CGACCCCGCC GTCGTCGCAC ACCTCCAGGA GCAAGACGCG TGGACGCGGG CGCGGCTCGC GCACCTGGAG CCGCTGCACG AACGGCTGTT CGCGGAGATC AAGGACCGCA CGCTGGAGAC GGACCTGTCC GTCCCGGTGC GGCTCGGCGG GCACTGGTAC TACGCGCGGA CCGTCGAGGG GCAGCAGTAC GCGATCCACG CGCGCGTCCC CGCCGCTGCG GACGGCTGGG AGCCGCCCGC CCTCTCGCCC GGCGTCGAGC CGGCGGGCGA GCGGGTGCTG CTCGACGAGA ACGCGCTCGC CGAGGGGCAC GAGTTCTTCG CGCTCGGCGG CACCGAGGTC TCCGGCGACG GGCGGCTCCT CGCCTACCAG GTCGACACCC AGGGCGACGA GCGGTACGTG CTGCGGTTCC GCGACCTGGC CACGGGGAGC GACCTGCCCG ACGTCGTCGA GGAGACCTCG CCCGGCGTCG CGCTCACGCC CGGGTACGTC TTCTACACGA CCGTCGACGA CGCCTGGCGG CCGCACCGCG TGTGGCGGCA CCGGCTCGGC AGCCCGTCCG CCGACGACGT CCTGGTGCTC GAGGAGCCCG ACGAGCGGTT CTGGGTGGGC GTGGGCCTGA CCCGGTCGCA GCGCTTCGCG CAGGTGGAGC TCGCGTCGAA GGTCACCACC GAGGTGCGGC TGATCGCGGC CGAGGCGCCG ACGGCGGAAC CGGTCGTGGT GTGGCCGCGC CGCGAGGGCG TCGAGTACAC GGTCGAGGAC GCGGGCGCCG AGCTGCTGGT GCTGCACAAC TCCGGCGCGG AGAACTTCGA GCTGGTCGCG CTGCCGCTGC CCGACGACCT GCAGGCGCCC GGCGCCTCCG CCGCGTTCGC CCCGGAGCGA GCCTCCGTCG TCGTGCCGCA CGACCCGGCC GTACGCCTGG ATGGCGTTGA CGCGTTCGCC CGCCACCTGG TGCTGAGCTA CCGCCGCGAC GCCACCCCCC GCGTCGCGAT CGCCGCCTAC CCGAGCCCGG TGGTTGAGCC GCTGCCGGTG GTTGAGCCGC TTCCGGTGGT TGAGCCTGTC GAAACCACGC CCCCGGTGGT CGACCCGCCC CCGGTGGTTG AGCCTGTCGA AACCACCCCA CCCCCGACCC GCACACCGCC CGCCCTCCTC ACCTGGCGCG AGATCACCAC CGGCGAGACC CTCGAAGCCG TCCAGCTCGA CGCGTCCCCC ATGCTCGACC AGCCGATGGT CCGCGTCGTC GTCGAGTCGT TCACCACCCC ACGCACGGTC TACGACGTCG TGCTGGCCAC GGGCGAGCTG ATCCTGCGCA AGCGACAGCC GGTCCTGGGC GGCTACACCC CATCCGACTA CGCCCAGACC CGCGCCTGGG CAACGGCCCC GGACGGCACG CAGATCCCGA TCTCGCTGGT GTGGCGGCGT GATCGGTTCG TGGGCTCGGT GCCGGTTCGT GGGTCCGAGC CCACGAACCG GCACCGAACC CACGAACCGA CGGGGCCTGC GCCCCTTCTT CTCTACGGGT ACGGGGCCTA CGAGTACTCG CTCGATCCCT GGTTCTCCGT GCCGCGGTTG TCGCTGCTCG ACCGTGGCGT GGTGTTCGCC GTCGCGCACG TGCGGGGCGG CGGCGAGCTC GGGCGGCGCT GGTACGACGA CGGGAAGCTG CTCGCGAAGC GCAACACGTT CACCGACTTC GTCGCCGTCG CCCAGCACCT CGTGGACACC GGGTGGACGA CGCCGCAGCG GCTCGCGGCC GAGGGCGGGT CCGCGGGCGG GCTGCTCATG GGTGCCGTCG CGAACCTCGC ACCGCACCTG TTCGCGGGCA TCCACGCGGC CGTCCCCTTC GTCGACCCGC TGACGTCGAT CCTCGACCCG TCCCTGCCGC TGACCGTCAC CGAGTGGGAG GAGTGGGGCA ACCCGCTCGA CGACCCGGAC GTGTACGCGT ACATGAAGGG CTACACGCCG TACGAGAACG TCCCCGCCGA CGCCTCCGCG TACCCGCCGA TCCTCGCGAC GACGTCGCTG CACGACACCC GCGTGCTGTA CGTCGAACCC GCCAAGTGGG TCGCGCGGCT GCGTGCCGCG GGCGCCCCGG CGCTGCTGCG CATCGAGATG TCGGCCGGGC ACGGCGGGGT GTCCGGCCGG TACTCGCGCT GGCGGCAGAT CGCGGAGGAG AACGCCTGGC TCCTCGACGT GCTGGGCGCG GCGGACTGA
|
Protein sequence | MHDAPPVTTT PDDDAPAAPP LTPRRPTPRT HHGDVVIDDY EWLRDADDPA VVAHLQEQDA WTRARLAHLE PLHERLFAEI KDRTLETDLS VPVRLGGHWY YARTVEGQQY AIHARVPAAA DGWEPPALSP GVEPAGERVL LDENALAEGH EFFALGGTEV SGDGRLLAYQ VDTQGDERYV LRFRDLATGS DLPDVVEETS PGVALTPGYV FYTTVDDAWR PHRVWRHRLG SPSADDVLVL EEPDERFWVG VGLTRSQRFA QVELASKVTT EVRLIAAEAP TAEPVVVWPR REGVEYTVED AGAELLVLHN SGAENFELVA LPLPDDLQAP GASAAFAPER ASVVVPHDPA VRLDGVDAFA RHLVLSYRRD ATPRVAIAAY PSPVVEPLPV VEPLPVVEPV ETTPPVVDPP PVVEPVETTP PPTRTPPALL TWREITTGET LEAVQLDASP MLDQPMVRVV VESFTTPRTV YDVVLATGEL ILRKRQPVLG GYTPSDYAQT RAWATAPDGT QIPISLVWRR DRFVGSVPVR GSEPTNRHRT HEPTGPAPLL LYGYGAYEYS LDPWFSVPRL SLLDRGVVFA VAHVRGGGEL GRRWYDDGKL LAKRNTFTDF VAVAQHLVDT GWTTPQRLAA EGGSAGGLLM GAVANLAPHL FAGIHAAVPF VDPLTSILDP SLPLTVTEWE EWGNPLDDPD VYAYMKGYTP YENVPADASA YPPILATTSL HDTRVLYVEP AKWVARLRAA GAPALLRIEM SAGHGGVSGR YSRWRQIAEE NAWLLDVLGA AD
|
| |