Gene Xcel_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_0109 
Symbol 
ID8647604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp117323 
End bp119671 
Gene Length2349 bp 
Protein Length782 aa 
Translation table11 
GC content73% 
IMG OID 
ProductOligopeptidase B 
Protein accessionYP_003324708 
Protein GI269954919 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCACGACG CCCCGCCTGT CACCACGACG CCCGACGACG ACGCCCCGGC CGCGCCGCCC 
CTGACCCCCC GGCGACCCAC CCCGCGCACC CACCACGGCG ACGTCGTCAT CGACGACTAC
GAGTGGCTGC GCGACGCCGA CGACCCCGCC GTCGTCGCAC ACCTCCAGGA GCAAGACGCG
TGGACGCGGG CGCGGCTCGC GCACCTGGAG CCGCTGCACG AACGGCTGTT CGCGGAGATC
AAGGACCGCA CGCTGGAGAC GGACCTGTCC GTCCCGGTGC GGCTCGGCGG GCACTGGTAC
TACGCGCGGA CCGTCGAGGG GCAGCAGTAC GCGATCCACG CGCGCGTCCC CGCCGCTGCG
GACGGCTGGG AGCCGCCCGC CCTCTCGCCC GGCGTCGAGC CGGCGGGCGA GCGGGTGCTG
CTCGACGAGA ACGCGCTCGC CGAGGGGCAC GAGTTCTTCG CGCTCGGCGG CACCGAGGTC
TCCGGCGACG GGCGGCTCCT CGCCTACCAG GTCGACACCC AGGGCGACGA GCGGTACGTG
CTGCGGTTCC GCGACCTGGC CACGGGGAGC GACCTGCCCG ACGTCGTCGA GGAGACCTCG
CCCGGCGTCG CGCTCACGCC CGGGTACGTC TTCTACACGA CCGTCGACGA CGCCTGGCGG
CCGCACCGCG TGTGGCGGCA CCGGCTCGGC AGCCCGTCCG CCGACGACGT CCTGGTGCTC
GAGGAGCCCG ACGAGCGGTT CTGGGTGGGC GTGGGCCTGA CCCGGTCGCA GCGCTTCGCG
CAGGTGGAGC TCGCGTCGAA GGTCACCACC GAGGTGCGGC TGATCGCGGC CGAGGCGCCG
ACGGCGGAAC CGGTCGTGGT GTGGCCGCGC CGCGAGGGCG TCGAGTACAC GGTCGAGGAC
GCGGGCGCCG AGCTGCTGGT GCTGCACAAC TCCGGCGCGG AGAACTTCGA GCTGGTCGCG
CTGCCGCTGC CCGACGACCT GCAGGCGCCC GGCGCCTCCG CCGCGTTCGC CCCGGAGCGA
GCCTCCGTCG TCGTGCCGCA CGACCCGGCC GTACGCCTGG ATGGCGTTGA CGCGTTCGCC
CGCCACCTGG TGCTGAGCTA CCGCCGCGAC GCCACCCCCC GCGTCGCGAT CGCCGCCTAC
CCGAGCCCGG TGGTTGAGCC GCTGCCGGTG GTTGAGCCGC TTCCGGTGGT TGAGCCTGTC
GAAACCACGC CCCCGGTGGT CGACCCGCCC CCGGTGGTTG AGCCTGTCGA AACCACCCCA
CCCCCGACCC GCACACCGCC CGCCCTCCTC ACCTGGCGCG AGATCACCAC CGGCGAGACC
CTCGAAGCCG TCCAGCTCGA CGCGTCCCCC ATGCTCGACC AGCCGATGGT CCGCGTCGTC
GTCGAGTCGT TCACCACCCC ACGCACGGTC TACGACGTCG TGCTGGCCAC GGGCGAGCTG
ATCCTGCGCA AGCGACAGCC GGTCCTGGGC GGCTACACCC CATCCGACTA CGCCCAGACC
CGCGCCTGGG CAACGGCCCC GGACGGCACG CAGATCCCGA TCTCGCTGGT GTGGCGGCGT
GATCGGTTCG TGGGCTCGGT GCCGGTTCGT GGGTCCGAGC CCACGAACCG GCACCGAACC
CACGAACCGA CGGGGCCTGC GCCCCTTCTT CTCTACGGGT ACGGGGCCTA CGAGTACTCG
CTCGATCCCT GGTTCTCCGT GCCGCGGTTG TCGCTGCTCG ACCGTGGCGT GGTGTTCGCC
GTCGCGCACG TGCGGGGCGG CGGCGAGCTC GGGCGGCGCT GGTACGACGA CGGGAAGCTG
CTCGCGAAGC GCAACACGTT CACCGACTTC GTCGCCGTCG CCCAGCACCT CGTGGACACC
GGGTGGACGA CGCCGCAGCG GCTCGCGGCC GAGGGCGGGT CCGCGGGCGG GCTGCTCATG
GGTGCCGTCG CGAACCTCGC ACCGCACCTG TTCGCGGGCA TCCACGCGGC CGTCCCCTTC
GTCGACCCGC TGACGTCGAT CCTCGACCCG TCCCTGCCGC TGACCGTCAC CGAGTGGGAG
GAGTGGGGCA ACCCGCTCGA CGACCCGGAC GTGTACGCGT ACATGAAGGG CTACACGCCG
TACGAGAACG TCCCCGCCGA CGCCTCCGCG TACCCGCCGA TCCTCGCGAC GACGTCGCTG
CACGACACCC GCGTGCTGTA CGTCGAACCC GCCAAGTGGG TCGCGCGGCT GCGTGCCGCG
GGCGCCCCGG CGCTGCTGCG CATCGAGATG TCGGCCGGGC ACGGCGGGGT GTCCGGCCGG
TACTCGCGCT GGCGGCAGAT CGCGGAGGAG AACGCCTGGC TCCTCGACGT GCTGGGCGCG
GCGGACTGA
 
Protein sequence
MHDAPPVTTT PDDDAPAAPP LTPRRPTPRT HHGDVVIDDY EWLRDADDPA VVAHLQEQDA 
WTRARLAHLE PLHERLFAEI KDRTLETDLS VPVRLGGHWY YARTVEGQQY AIHARVPAAA
DGWEPPALSP GVEPAGERVL LDENALAEGH EFFALGGTEV SGDGRLLAYQ VDTQGDERYV
LRFRDLATGS DLPDVVEETS PGVALTPGYV FYTTVDDAWR PHRVWRHRLG SPSADDVLVL
EEPDERFWVG VGLTRSQRFA QVELASKVTT EVRLIAAEAP TAEPVVVWPR REGVEYTVED
AGAELLVLHN SGAENFELVA LPLPDDLQAP GASAAFAPER ASVVVPHDPA VRLDGVDAFA
RHLVLSYRRD ATPRVAIAAY PSPVVEPLPV VEPLPVVEPV ETTPPVVDPP PVVEPVETTP
PPTRTPPALL TWREITTGET LEAVQLDASP MLDQPMVRVV VESFTTPRTV YDVVLATGEL
ILRKRQPVLG GYTPSDYAQT RAWATAPDGT QIPISLVWRR DRFVGSVPVR GSEPTNRHRT
HEPTGPAPLL LYGYGAYEYS LDPWFSVPRL SLLDRGVVFA VAHVRGGGEL GRRWYDDGKL
LAKRNTFTDF VAVAQHLVDT GWTTPQRLAA EGGSAGGLLM GAVANLAPHL FAGIHAAVPF
VDPLTSILDP SLPLTVTEWE EWGNPLDDPD VYAYMKGYTP YENVPADASA YPPILATTSL
HDTRVLYVEP AKWVARLRAA GAPALLRIEM SAGHGGVSGR YSRWRQIAEE NAWLLDVLGA
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