Gene Xcel_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_0027 
Symbol 
ID8647522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp30731 
End bp31834 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content72% 
IMG OID 
ProductPeptidoglycan-binding domain 1 protein 
Protein accessionYP_003324626 
Protein GI269954837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGGCTG GTGCACTGCT GGTCGGTGGG GGGTGGGTCC TTGCTCAGCA GATGGTCTCT 
CCGGAACAGG TGGCCGCCCA GGCCGAACCG CCGCCCCCGA CGCCGGTCGT GGCGGCACTG
CGCGAGGGCT ACCTGCACGG AACTATGACC ATGACGGCCA CGGCCGTGAG CAGCGGCGTT
CACGAGGTCG TGGCTCCGAA AGCGCTCGAC GGGGTCGTGA CGTTCAGCGA CTTCGCCGTG
GCGGGCGAGG TGCAAGCCGG GTCGGCGGTC GTCCGGGTGA ACGGACGTCC GGTGATCGTC
ATGGCGGGGC CGTTCCCGCT GTACCGGGAC CTGACCTCGG GTGACACGGG TGACGACGTG
CTCATGCTTC AGCGGGCGCT CGTCGACGCC GGACACCTGC GCGGAACCCC GGACGGTGTC
TTCGGAGCAC GCACCGCAGC CGCCGTCCGC GCCCTCTACA GGACGGTCGG GTTCCCCGCT
CCGACCACGG CCGTCGCGCC CGAGCCCGCC GTAGCGGCCT CATCCGCGAC GGCGGATGGC
GAGCCGCTGG TGGCGCCGGT CCGGCCTGCG ACGATGGTGC GAGCAGCGGA GCTGGTGTTC
ACTGGCGCGC TACCCGCGCA GGTCGGGTCT GTCGTACCGG TCGGGGCCAC CGTCGAACCG
GGCACGGTGC TGGCGAGCCT CACGGTGGGC GCAACAGAGC TGCGCGCCGA TGTGCCACCT
GAGGCGATCG GCCCGCTCGC CGTCGGCGCG GCGGCGACGT TCGTTGGTGA TGGCGGCGCA
GCAGGGTTGG CCCAGGTGGA GTCCATCACG CCGGGTCAGG ACGGGCAGAT GCAGGTGCAC
TGGTCCCTCG AGGGTGCCGT GGCGGTCGGG ACGGACTACG TCCTGACGGT GGAGAACCCG
GCGGCGCAGG ATGCGCCTAC CCTGCTGGCA CCGATCGCGG CCCTGGTGAG TCGCGGCGGT
GTGGACACGG TCACCGTGCG TGAGGATGAC GTGTTCCGTG AGGTCGCGGT CGAGGTCCTC
GGCATGCAGG GCGCTGTCGC CGCGATCCGT GCCCAGGACG ACGCCGGCGT GCTGCGCGCG
GGGAGCGAGG TGCGCCTTGT CTGA
 
Protein sequence
MLAGALLVGG GWVLAQQMVS PEQVAAQAEP PPPTPVVAAL REGYLHGTMT MTATAVSSGV 
HEVVAPKALD GVVTFSDFAV AGEVQAGSAV VRVNGRPVIV MAGPFPLYRD LTSGDTGDDV
LMLQRALVDA GHLRGTPDGV FGARTAAAVR ALYRTVGFPA PTTAVAPEPA VAASSATADG
EPLVAPVRPA TMVRAAELVF TGALPAQVGS VVPVGATVEP GTVLASLTVG ATELRADVPP
EAIGPLAVGA AATFVGDGGA AGLAQVESIT PGQDGQMQVH WSLEGAVAVG TDYVLTVENP
AAQDAPTLLA PIAALVSRGG VDTVTVREDD VFREVAVEVL GMQGAVAAIR AQDDAGVLRA
GSEVRLV