Gene Xaut_4838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4838 
Symbol 
ID5420573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009717 
Strand
Start bp49511 
End bp51436 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content67% 
IMG OID640873506 
Producthypothetical protein 
Protein accessionYP_001409286 
Protein GI154243713 
COG category[I] Lipid transport and metabolism 
COG ID[COG3243] Poly(3-hydroxyalkanoate) synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.154027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.12668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCA CATGGCGCAT CGGGATCGAC ATCAGCCTCG CGCTGATCGG AAACGAGCAC 
GTCACCATGA CACTGCAGAA TGGATTCAGC CCGCCTGCTG CTGATACGGT ATCATTATCC
TTAGAGACAA TCTCTTTTGA CAGCACTAGC TGGGGATCGG CGCCGGTCTT ACGGCCGACA
AACCGGGAGA TGCGTGTCGT TGATCCAGCA AGGCTCCTCC AGGCTCTTTT CATTTACACG
CAGGATTCCG TAGAACGTAC CATCCTGTTC TGGGACACGC TGCGTCAGCG CGCCGACAAC
ATGCTGGCGC ATGAACGCGC GGGGAAGCCG GCGCTGCTCG ACTTCGACTA CGACGTGCTC
CTCGATGCAC GGCAGTTCGA GCATCCGGCA AACTATGCCC TGCTGCGGGT CACCCGCGTG
GGAGACGAGT GCCTGGAAGA TTGCCTGGAC GCGTCCAAGC CGCCCGTGGT GATCCTTGAT
CCGCGCGCCG GCCACGGGCC CGGGATCGGC GGCTTCAGGC AGGAGTCGGA AGTGGGTGTC
GCCCTGCACC AGGGGCATCC GGTCTATTTC GTCACCTTCT TTCCCGAGCC CGCCCCGGGG
CAGACGCTCG CCGACGTGCT CCACGCCCTG CGGCGGTTCA TCGAGGAGGT GTCGCGCCTC
CACCCCGGCC AGGCGCCCGT GCTCTACGGC AATTGCCAGG CCGGCTGGGC GGTGACGCTG
CTCGCCGCCG ACTGCGCGGG GCTGACCGGA ACCACCGTTC TCAACGGGAC CCCCCTCTCC
TACTGGGCCG GCGAGAGCGG CATCAACCCC ATGCGCATCG CCGCCGGCTT CGAGGGCGGG
GCGTGGCTGA CCCACCTCCT CGCCGACCTC GGGGACGGCC GCTTCGACGG CGCCTTCCTG
GTGCAGAACT TCGAGGGGCT GAAGCCCGAG GCCGTGTGGG AGAAGTATGC GAACCTCTAC
GCCCACGTGG ATACCGAGCG CGAGCGGTTC CTCGCCTTCG AGCGCTGGTG GGGCGGCTAT
TACTTCCTGA GCCGCGAGGA AATCCTCGCC ATCGTGGAGA ACTTCTTCGT CGGCAACAGG
CTGGAGCAGG GCCGCGTGCG GATCTGCCAC GGGTGCCACG TGGATCTGCG GCGCATCCGC
AACCCGATGG TGATCTTCGC CTCCTACGGC GACGACATCA CCCCGCCCCA CCAGGCGCTC
GGCTGGATCC CCACCGTCTA CAGGGATACG GACGACCTGA AGGCGGCGGG CCAGCGCATC
GTCTATCTCG TCAACCGGCA CGTGGGCCAT CTCGGCATCT TCGTGTCCGC CAAGGTCGCG
CGGCTGGAGC ATCGCGCCAT CCTTGAAAGC CTGCCGCGGA TCGAGGCTCT GCCGCCCGGC
CTCTACGAGA TGAAGATCGA CAATCCCTCG GGCGATCCCG ATTGCCGCGC CGGGGACTAC
ACCGTCCGTT TCGAAGCACG CCAGGTATCG GACATCCGCT TTGCTCGGGA GGATGCCGCG
TTCGAGCGCG TGCGCGACCT CTCCGAGCGC AACGAAGCCT TCTACCGCAC ATTCGTCAGC
CCCTGGGTGC GGGCGGTGAC GACGCCCTGG TCCGCGGCGG CGCTGGAGGC GATGCATCCC
ATGCGCACGA GCCGCCTCCT CCTGTCCGAG GGCTTCCTGC CCTGGATGCG CGGGGTTCGC
CGGCTCGCCG AAATGATCGG CGCGGACCGT CATCTGGCCG CTCCGGACAA TCCCTTCAAG
GTGGCGGAGG CGGTCGCCGT CTCGCGGGTC ACCGAAGGGA TCGAGCAGGG ACGGCGCCTG
CGGGACGCCG CGTGGGAGCG CGTCTTCGAC AGCCTCTATG GCGGCCCCAA CGCCGCCGGG
CCGGCTGTCC CCGCATCCCC GGCCACGGCC GGCGATGCGC TGCCGCGGGA TCGCGGATCG
ATCTGA
 
Protein sequence
MSRTWRIGID ISLALIGNEH VTMTLQNGFS PPAADTVSLS LETISFDSTS WGSAPVLRPT 
NREMRVVDPA RLLQALFIYT QDSVERTILF WDTLRQRADN MLAHERAGKP ALLDFDYDVL
LDARQFEHPA NYALLRVTRV GDECLEDCLD ASKPPVVILD PRAGHGPGIG GFRQESEVGV
ALHQGHPVYF VTFFPEPAPG QTLADVLHAL RRFIEEVSRL HPGQAPVLYG NCQAGWAVTL
LAADCAGLTG TTVLNGTPLS YWAGESGINP MRIAAGFEGG AWLTHLLADL GDGRFDGAFL
VQNFEGLKPE AVWEKYANLY AHVDTERERF LAFERWWGGY YFLSREEILA IVENFFVGNR
LEQGRVRICH GCHVDLRRIR NPMVIFASYG DDITPPHQAL GWIPTVYRDT DDLKAAGQRI
VYLVNRHVGH LGIFVSAKVA RLEHRAILES LPRIEALPPG LYEMKIDNPS GDPDCRAGDY
TVRFEARQVS DIRFAREDAA FERVRDLSER NEAFYRTFVS PWVRAVTTPW SAAALEAMHP
MRTSRLLLSE GFLPWMRGVR RLAEMIGADR HLAAPDNPFK VAEAVAVSRV TEGIEQGRRL
RDAAWERVFD SLYGGPNAAG PAVPASPATA GDALPRDRGS I