| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4764 |
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| Symbol | |
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| ID | 5421334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 5289488 |
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| End bp | 5291434 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640884028 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001419640 |
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| Protein GI | 154248682 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00177028 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAACG CCCGCCTCCT GAAGGCGCGT TTCGTCGCCG CCGCGCTCCT GCTCGCCCTG
GTGCTCGCCG TGGTCCTGCC CGACGTGGCC TTCGCCGCCG AGCCGGGGTT CCGCGGCTGG
TTCGTCCACA ACATGGCGCC CATCATGTTC GGCGCGCTGG TGGTGTTCCT GCTGCTGGGC
TACCCGGTGG CCTTCTCGCT GGCCGCCAAC GGCCTCATCT TCGCGCTGGT CGGCATCTGG
CTCGGCCTGT TCGAGCCCAA GTTCCTGCAG GCGCTGCCCG AACGCGTCTA CGGCACCATG
AACAACGAGG TGCTGCTGGC AGTCCCCTTC TTCACCTTCA TGGGGCTCAT CCTCGAGCGC
TCCGGCATGG CGGAGGACCT GCTCGACACC ATCGGGCAGG TGTTCGGCTC CATCCGCGGC
GGCCTCGCCT ATGCGGTGAT CTTCGTGGGC GCTCTGCTGG CTGCCACCAC CGGCGTGGTG
GCGGCCTCGG TGATCTCCAT GGGCCTCATC TCCCTGCCGA TCATGCTGCG CTACGGCTAC
GACCGGCGCG TGGCCTCGGG CGTCATCGCC GCCTCGGGCA CGCTGGCGCA GATCATTCCG
CCCTCCCTCG TGCTCATCGT CATGGCCGAC CAGCTGAACC GCTCGGTGGG CGACATGTAT
GAGGGCGCCT TCGTGCCGGG CCTGCTGCTC GCCTGCCTTT ATGCGCTCTA CATCTTTCTG
GTCTCTACCA TCTTCCCGAG CGCCGCACCC GGCCTGCCGC TGGAAGCCCA GACCCTGCGC
GACCCGGAAC AGAAGATCGT GCCCTCCCGC GTCCTCGGCG CCATCGCCGC GGCCGGCTTC
GCCTTCCTGA TCGCCACCGG TTCCCTGCCG CATCTCACCA CAGGCCTCAT CCCCGGCGTC
GCCAACACGG CGGTGTGGGG CGTGGTGGCT TTCGTGCTGC TCTATTTCAT CATGTCGGGA
ACGGCGCGGC TGCTGACGCC CTCGCTCTTC ATCGCGCTCT CCCTGTCCAT CGCCGGCGCC
ATCTTCCTGA TGACGGAAAC CGGGGTGAAG TTCGGCGCCG ACTTTGTGGT GCTCACCATG
TCCGCCACCG TGGGCTTCGC CTTCGTGGTG GCGGTGATCA ACCGCGTGTT CCGCCTCGGC
CTCCTGTCGA AGCTGGCGGA GCAGGTGGTG TTCGTGATGG TGCCACCGCT GGCGCTCATC
TTCCTGGTGC TGGGCACCAT CTTCATCGGC GTCGCCACGC CGACCGAGGG CGGCGCCATG
GGCTCGGTGG GCGCGCTCAT CCTCGCTTTC GCCCGTGGCC GGCTGAAGTT CGACCTGATG
CGGCAGGCCA CCTATTCCAC TGCCAAGCTC TCCGCCTTCG TGCTGTTCAT CCTGCTCGGC
GCGCGCGTGT TCTCGCTCAC CTTCTACGGG GTGGACGGCC ACAAGTGGGT GGAGGAACTG
CTGGTGTCGC TGCCCGGCGG GCAGATGGGC TTCCTCATCG CGGTGAACGC GCTGGTGTTC
GTGCTGGCCT TCTTCCTCGA TTATTTCGAG CTGGCCTTTA TCATCATCCC GCTGCTGGGG
CCGGCGGCCG ACAAGCTCGG CATCGACCTC ATCTGGTTCG GCGTGATGCT GGCGGTGAAC
ATGCAGACCT CGTTCATGCA TCCGCCCTTC GGCTTCGCCC TGTTCTTCCT GCGCTCGGTG
GCGGCCAAGG TGCCGTACAT CGACCGGGTG ACGGGCAAGC TGATGCAGCC GGTCACCACC
GGCCAGATCT ATTGGGGCGC GGTGCCGTTC GTCTGCATCC AGCTGGTCAT GGTGGCCCTC
ATCATCCTGT TCCCCGGCAT GGTGACCCAC TACAAGAGCG GCAGCGTCCA GCTCGACCAG
AACCAGATCC AGCAGCAGTT CGAGAACCTG TCTCCCGGCC TCGACGCGGC ACCGCCCCCG
CCGCTGGACC TCGGCTTCGG CAAATAG
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| Protein sequence | MINARLLKAR FVAAALLLAL VLAVVLPDVA FAAEPGFRGW FVHNMAPIMF GALVVFLLLG
YPVAFSLAAN GLIFALVGIW LGLFEPKFLQ ALPERVYGTM NNEVLLAVPF FTFMGLILER
SGMAEDLLDT IGQVFGSIRG GLAYAVIFVG ALLAATTGVV AASVISMGLI SLPIMLRYGY
DRRVASGVIA ASGTLAQIIP PSLVLIVMAD QLNRSVGDMY EGAFVPGLLL ACLYALYIFL
VSTIFPSAAP GLPLEAQTLR DPEQKIVPSR VLGAIAAAGF AFLIATGSLP HLTTGLIPGV
ANTAVWGVVA FVLLYFIMSG TARLLTPSLF IALSLSIAGA IFLMTETGVK FGADFVVLTM
SATVGFAFVV AVINRVFRLG LLSKLAEQVV FVMVPPLALI FLVLGTIFIG VATPTEGGAM
GSVGALILAF ARGRLKFDLM RQATYSTAKL SAFVLFILLG ARVFSLTFYG VDGHKWVEEL
LVSLPGGQMG FLIAVNALVF VLAFFLDYFE LAFIIIPLLG PAADKLGIDL IWFGVMLAVN
MQTSFMHPPF GFALFFLRSV AAKVPYIDRV TGKLMQPVTT GQIYWGAVPF VCIQLVMVAL
IILFPGMVTH YKSGSVQLDQ NQIQQQFENL SPGLDAAPPP PLDLGFGK
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