| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4729 |
|---|
| Symbol | |
|---|
| ID | 5422882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 5247318 |
|---|
| End bp | 5249150 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640883993 |
|---|
| Product | methylmalonyl-CoA mutase |
|---|
| Protein accession | YP_001419605 |
|---|
| Protein GI | 154248647 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
|---|
| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain
[TIGR00642] methylmalonyl-CoA mutase, heterodimeric type, beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.376161 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC TGCCCTTCGC GACCAACCTT GCCCCCGTCA CCCGCGAGGA CTGGCTGAAG
CTGGTCGAGG GCGTGCTGAA GGGCGCGCCC TACGACAAGC GCCTCGTCAC CCGCACCTAT
GAGGGCCTCA CCCTCGACGC TTTGCCCGAG CGCAAGGTGA AGGCCCCCAT CGTGGCGGGG
CGGCCGGCCG GCGCGCCGTG GGTTATCAGC GCCCGGGTGG ACCAGCCGGA CCTCGCCGCC
GCCCACGCGC AGGCGCTGGA GGACCTCGAC GGCGGCGCCT CCGGCCTTGC CCTGGTCTAT
GCTTCCTCGC CCTCGGCCTA TGGCTTCGGC CTGCCGGACG GCGCCGACCT GAAGGTGGTG
CTCAAGGACG TGCTGCTCGA CCTCATCGAG ACGCGCATCG AGAGCGGCGC CTTCCAGGGT
CGCGGCGAAG ACCTCGCCTT CGCCGATCAT GCGGAAGCCG CGGGCTTCGA TCCAAAGGGC
CTCGCCGTTT CCTTCGGCCT GAACCCGCTG GGGGATTTCG CCGCCGCGGG CACCCTGCCC
ATGGCGTGGC CGCTGCTCGC CAAGCGCTTC GCCGAGACCT CCGCCATTCT TGCGGCGCGC
GGCTTTGCCG GGCCGTTCGC GCGGGCGGAC GGCGGCGTGT TCCATGCGGC CGGAGCATCG
GACGCTCAGG AGCTGGCGGC GGTGCTCGCC ACCGCCGTGG CCTATCTCAA GGCCTATGGG
GAGGCCGGCA TCGCCCTGTC GGAGGCGGCG GCGCGCATCG AGGTCGCCCT GGTGGCGGAC
CTGAACCAGA CCGCCACCAT CGCCAAGTTC CGCGCCATCC GCCTGCTGTG GGGCGCGGTG
CTGCGCGAAT GCGGCCTGCC CGAAACCGCG CTGAAGGTGC ACGCCACCAC CGCGTGGCGC
TCGCTGACCC GGCGCGATCC TTATGTGAAC CTGCTGCGCA ACACGGTGGC GGCGTTCGCG
GCCGGCGTGG GCGGGGCGGA CAGCCTCACG GTGCTGCCCT TCACCCAGGC GCTGGGCCTG
CCCGACGCCT TCGCCCGGCG CCTTGCCCGC AACACCCAGG TGATGCTGCT GGAGGAGAGC
AACGTCCACC GCGTGGCAGA TCCCGGCGCC GGCGCCGGCG CGGTTGAGGC CCATACCGAC
GGGCTCGCCG AAAAGGCGTG GGACCTGTTC CGCACCATCG AGAAGCGCGG CGGCATGGCC
GACGTGCTGG AGGACCGATG GCTGAAGGCC GAGATCACCG AGGTGAAGGC CCGCCGCGAC
AAGGATGTGG CCACCCGCAA GGCGCCCATC ACCGGCACCT CGGAATTCCC CATCCTGGTG
CAGCAGGCGC CGGAAGTGCT GGCGCCTCTG CCCGCCACCT TCGAGCCCGT GGCCGACGGC
GCACTGACGC CCCATCGTAT TGCCGAGCCG TTCGAGGCCC TGCGCGACAA GGCGGAAGCC
GCCGCCCAGG CGCCGGCCGT CTTCCTCGCC ACGCTCGGTT CCGTCGCCGC CTTCACGGCG
CGCGCCGGCT TCGCCAAGAA CTTCTTCGAA GCCGGCGGCA TCGCCGCCCC CGTCCCGGAC
GGCTTCGCCG ACCGCGACGC GCTGGTAGCC GCCTTCAAGG CCTCCGGCAC GCCGTTCGCC
TGCCTCGTCT CCTCGGACGA GATCTACGGC GCCGAGGGCG CCGCAACAGC CGAGGCCCTG
AAGGTTGCGG GCGCCAGCGC CATCTGGCTC GCCGGCAAGC CCGCCGAGCT GGAGGCGGCG
CTCAAGGCGG CGGGCGTTTC CGGCTTCATC TTCGCCGGCT GCGACGTGCT GGAGACGCTG
ACCGCCGCGC AGGCGGCGGC GGGACTGGCC TGA
|
|---|
| Protein sequence | MTALPFATNL APVTREDWLK LVEGVLKGAP YDKRLVTRTY EGLTLDALPE RKVKAPIVAG
RPAGAPWVIS ARVDQPDLAA AHAQALEDLD GGASGLALVY ASSPSAYGFG LPDGADLKVV
LKDVLLDLIE TRIESGAFQG RGEDLAFADH AEAAGFDPKG LAVSFGLNPL GDFAAAGTLP
MAWPLLAKRF AETSAILAAR GFAGPFARAD GGVFHAAGAS DAQELAAVLA TAVAYLKAYG
EAGIALSEAA ARIEVALVAD LNQTATIAKF RAIRLLWGAV LRECGLPETA LKVHATTAWR
SLTRRDPYVN LLRNTVAAFA AGVGGADSLT VLPFTQALGL PDAFARRLAR NTQVMLLEES
NVHRVADPGA GAGAVEAHTD GLAEKAWDLF RTIEKRGGMA DVLEDRWLKA EITEVKARRD
KDVATRKAPI TGTSEFPILV QQAPEVLAPL PATFEPVADG ALTPHRIAEP FEALRDKAEA
AAQAPAVFLA TLGSVAAFTA RAGFAKNFFE AGGIAAPVPD GFADRDALVA AFKASGTPFA
CLVSSDEIYG AEGAATAEAL KVAGASAIWL AGKPAELEAA LKAAGVSGFI FAGCDVLETL
TAAQAAAGLA
|
|---|
| |