| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4702 |
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| Symbol | |
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| ID | 5423721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 5213303 |
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| End bp | 5216272 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640883966 |
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| Product | sarcosine oxidase alpha subunit family protein |
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| Protein accession | YP_001419578 |
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| Protein GI | 154248620 |
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| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.272798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.7148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCC TCGCCCATGA CGGCCTCATC GACCGCAGCC GCACCCTCTC TTTCGCCTTC
GACGGCAAGA CCTTCACTGG CCATCCCGGC GATACACTGG CCTCGGCGCT GCTCGCCAAC
GGCGTGCGGC TCGTCGGCCG CTCGTTCAAG TATCACCGCC CGCGCGGCGT GGTGACGGCG
GGCTCCGAGG AGCCCAACGC TCTGGTGGAG CTGCGCACCG GCGCCCGGCG CGAGCCCAAC
ACCCGCGCCA CCACGGTGGA GCTTTACGAC GGCCTCGAAG CCGCGAGCCA GAACCGCTGG
CCCTCGCTCG ACCACGACGT GCTGAGCGTG AACCGGCTGG TGTCGCCCTT CCTCGGCGCG
GGCTTCTACT ACAAGACCTT CATGTGGCCC GCCGCGTTCT GGGAGAAGGT CTACGAGCCG
GTCATCCGCC GCGCCGCGGG CCTCGGCCGC GCCGCCAACG CGCCGGACCC GGACCATTAT
GAGAAGGCCA CCGCCTTCTG CGACGTGCTC GTCATCGGCT CCGGCGCGGC CGGCCTGGCG
GCGGCGCTGG CGGCAGCGCG TTCCGGCGCG CGGGTGATCC TCGCGGACGA AGACTTCCGC
CTCGGTGGCC GGCTGCTCTC CGAGCGCGCG GTGATCAATG GCGGTTCCGC CCTCGATTTC
GTGGCGAGCG CGCAAGCCGA GCTTTCGAGC CTGCGCAATG TGCGGCTCAT ACCGCGCACC
ACCGTGTTCG GCGCCTATGA CGGCAGCGAA TATGGCGCCG TCGAGCGGGT GAGCGATCAC
CTTCCCGCCC CCCTGCCCTT CCAGCCGCGC CAGCGCCTGT GGCGGATCGT GGCCAAGCGC
TGCGTGCTGG CGGCGGGTGC CTTCGACCGG CCCATCGTGT TCCCCGGCAA CGACCGGCCG
GGTGTCATGT CGGCGCTGGC ATTGGCCACC TACGCCACCC GCTACGGCGC GGGCGCGGGG
GCAAATGCTG CCGTCTTCTC CACCAATGAC CATGCGGTGG CCGCCGCCCT CGACGCGGCG
GACGCGGGCC TGAAGGTCGA CGCCGTCATC GACGTGCGCC CCGCTTTGCC CGAACCGCTC
GCGGCGCGGG CCAAGGCGCT GGGCGTGCGC GTCATCACCG AAGGCGAGGT GGTGGCGACC
TCCGGCAAGT GCCTGAAATC CGTCACCGTG CGCACCCCGC GCGGCAGCGA GACGCTGGCG
GTGGAAGCCC TCGGCGTGTC GGGTGGCGCA ACGCCCAACC TCAACCTCAC CTGCCATCTG
GGTGGAAAGC CCGTGTGGCG CGAGGACATC GCCGCCTTCG TCCCTGGCGC GGTGCCGCCC
GGCATGGCAG TGGCCGGCGC GGCGGCGGGC ACCTTCGGTC TTGCCGATAT CCTCGCCGAA
GGCACCCGCC TCGGCGCATC GGCCGCGTCC GACGCCGGCT TCGCCGCATC CCCGGCGCCG
GCTCCGCAGG CAGAGGGCGC GCCCACCGGC TTCAAGGCGG TCTTCCATGT GAAGGGCAAG
GGGTCAAAGG GCGGTCCAGC CTTCGTGGAC CAGCAGAACG ACGTGACCGC CAAAGACGTG
GCCCTCGCCC ACCGCGAAGG CTTCCGCGCG GTGGAATTGC TGAAGCGCTA CACCACGCTG
GGCATGGCCA CCGATCAGGG CAAGACCTCC AACATGGCCG GTCTCGCGGT GATGGCGGAG
CTGACCGGAA AAGGCATTCC CGCCACCGGC ACCACCGTGT TCCGCCCGCC CTACACGCCG
GTGGCGCTGG GCGTGCTGGC CGGCCACCAT CGCGGCATCG ACTTCAAGCC GGCCCGTCCC
ACCCCGACCC ACGCGTGGGC GCAAGCGCAG GGCGCGGTCT TCGTGGAAAC CGGCCTGTGG
ATGCGCGCCG CCTATTTCCC CAAGCCCGGT GAAAAGGACT GGCTGGAAAG CGTGAACCGC
GAGGTGAAAG CCACGCGTGA AAGCGTGGGC GTCATCGACG TATCCACCTT CGGCAAGATC
GACCTTCAGG GCCCGGACGT GGGCATGCTG CTCGATCGCG TCTACATCAA CATGTTCTCG
ACGCTGGCCG TGGGCAAGGC GCGCTACGGC GTGATGCTGC GCGAGGACGG CCTGGTCATG
GACGACGGCA CCACCGCACG CCTCGCCGAC GACCATTATG TGATGACCAC CACCACGGCC
AACGCCGCCA AGGTCTACCA GCATCTGGAA TTCTGCCTGC AGGTGCTGTG GCCGGAGCTG
GATGTGTGCC TCGCCTCGGT GTCTGAGCAA TGGGCGCAGA TCGCCGTGTC CGGGCCGCGC
TCCCGCGAGG TGCTGGCCAA GATCGTGGAT GGGTTGGATG TGTCCAATGC CGGCCTCCCC
TTCATGGGGG TGGCGCAGGG CACGGTGATG GGCGGCGTTC AGGCGCGCAT CTTCCGCCTC
TCCTTCTCCG GGGAGCTGGG CTACGAGATC GCGGTGCCGG CCCGCCACGG CCCGGCGCTC
ATGCAGGCGC TGATGGCGGC GGGCGCGCCC TTCGGCATCA CGCCCTATGG GGTGGAGGCG
CTGGGCGTGC TGCGCATCGA GAAGGGCCAT GTCTCCGGCA GCGAGCTGAC GGGCCAGACC
TCGGCGCGCG ATCTCGGCCT CGGCAAGATG GCGTCCACCA AGAAGGACTA TATCGGCCGG
GTGATGGCCG GGCGGCCCGC CTTCACCGAC CCGGACCGGC CCAGCTTCGT CGGCTTCAAG
CCGGTGGACC GCACCGCGCG GCTGCGCGCC GGCGCCCATT TCCTGAAAGC CGGCGCGGCG
GCGTCGACCG AGAACGACGA GGGCTACATG ACCTCGACCG CCTTCTCACC CACCCTCGGC
CACTACATCG GCCTCGGCCT TTTGAAACGC GGGCCGGAGC GCATGGGCGA GAAGGTGCGC
GCCTATGACC CGCTGCGGGG CGGTGACATC GAGGTCGAGG TGTGCTCTCC CGCATTCATT
GACCCGCAAG GGGAGAAGCA GCGTGTCTGA
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| Protein sequence | MTRLAHDGLI DRSRTLSFAF DGKTFTGHPG DTLASALLAN GVRLVGRSFK YHRPRGVVTA
GSEEPNALVE LRTGARREPN TRATTVELYD GLEAASQNRW PSLDHDVLSV NRLVSPFLGA
GFYYKTFMWP AAFWEKVYEP VIRRAAGLGR AANAPDPDHY EKATAFCDVL VIGSGAAGLA
AALAAARSGA RVILADEDFR LGGRLLSERA VINGGSALDF VASAQAELSS LRNVRLIPRT
TVFGAYDGSE YGAVERVSDH LPAPLPFQPR QRLWRIVAKR CVLAAGAFDR PIVFPGNDRP
GVMSALALAT YATRYGAGAG ANAAVFSTND HAVAAALDAA DAGLKVDAVI DVRPALPEPL
AARAKALGVR VITEGEVVAT SGKCLKSVTV RTPRGSETLA VEALGVSGGA TPNLNLTCHL
GGKPVWREDI AAFVPGAVPP GMAVAGAAAG TFGLADILAE GTRLGASAAS DAGFAASPAP
APQAEGAPTG FKAVFHVKGK GSKGGPAFVD QQNDVTAKDV ALAHREGFRA VELLKRYTTL
GMATDQGKTS NMAGLAVMAE LTGKGIPATG TTVFRPPYTP VALGVLAGHH RGIDFKPARP
TPTHAWAQAQ GAVFVETGLW MRAAYFPKPG EKDWLESVNR EVKATRESVG VIDVSTFGKI
DLQGPDVGML LDRVYINMFS TLAVGKARYG VMLREDGLVM DDGTTARLAD DHYVMTTTTA
NAAKVYQHLE FCLQVLWPEL DVCLASVSEQ WAQIAVSGPR SREVLAKIVD GLDVSNAGLP
FMGVAQGTVM GGVQARIFRL SFSGELGYEI AVPARHGPAL MQALMAAGAP FGITPYGVEA
LGVLRIEKGH VSGSELTGQT SARDLGLGKM ASTKKDYIGR VMAGRPAFTD PDRPSFVGFK
PVDRTARLRA GAHFLKAGAA ASTENDEGYM TSTAFSPTLG HYIGLGLLKR GPERMGEKVR
AYDPLRGGDI EVEVCSPAFI DPQGEKQRV
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