| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4696 |
|---|
| Symbol | |
|---|
| ID | 5423839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 5207083 |
|---|
| End bp | 5207790 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640883960 |
|---|
| Product | glutamate synthase family protein |
|---|
| Protein accession | YP_001419572 |
|---|
| Protein GI | 154248614 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0070] Glutamate synthase domain 3 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.917164 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCCA TCTCCCCCGA CATCACCTTC GACCTCGCCG GCACCTCCCT GCGCGAGCTG
AACGCGGCGC TGCATGCCGC CACCGGCGAG AGCAACGCCC GCCGCTGGCG GGTGCTGAAC
CCCAATGGCC GCCACGCGGT AGCGGTGGGC ATCAATGCCC CCCTGACCGT CGAGATCGAG
GGCCACGTGG GCTATTACTG CGCCGGCATG AATGCCGAGG CGTCGGTGAT CATCCACGGC
AATGCCGGCG TGGGCCTTGC CGAGAACATG ATGAGCGGCT TCGTCCATGT GCGCGGCGAT
GCCAGCCAGG CGGCCGGCGC CACCGGCCAC GGAGGCCTGC TGGTGATCGA TGGCAATGCC
TCCGCCCGCT GCGGCATCTC CATGAAGGGC ATCGACATCG TGGTGAAGGG CTCGGTGGGC
CACATGAGTG CCTTCATGGG CCAGTCCGGC AGCCTCATCG TGCTGGGCGA TGCCGGCGAG
GCGCTGGGCG ACAGCCTCTA TGAGGCCAAG CTCTTCGTGC GCGGCTCCGT CAAGTCGCTC
GGCGCCGATT GCATCGAGAA GGAGCTGCGC GACGAGCACA AGGCGCTCCT GGCGGAAAAG
CTGAAGGCCG CGGGCCTGGA AGGCACCGTC GATGTCGCCG AGTTCAAGCG CTACGGCTCG
GCCCGGCAAC TCTACAATTT CCACGTCGAC AACGCGTCCG CGTACTGA
|
|---|
| Protein sequence | MNAISPDITF DLAGTSLREL NAALHAATGE SNARRWRVLN PNGRHAVAVG INAPLTVEIE
GHVGYYCAGM NAEASVIIHG NAGVGLAENM MSGFVHVRGD ASQAAGATGH GGLLVIDGNA
SARCGISMKG IDIVVKGSVG HMSAFMGQSG SLIVLGDAGE ALGDSLYEAK LFVRGSVKSL
GADCIEKELR DEHKALLAEK LKAAGLEGTV DVAEFKRYGS ARQLYNFHVD NASAY
|
|---|
| |