| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4657 |
|---|
| Symbol | |
|---|
| ID | 5421424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 5146883 |
|---|
| End bp | 5148700 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640883921 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001419534 |
|---|
| Protein GI | 154248576 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.168066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.490255 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGGAG TCGTGGACGT GACGGCGCAG GCAGCCAAGA CTTCCGAAGC CCCCAGCGGC
CCGCTGCTGG AGGTGCGCGA CCTCACCGTG GAATTCGCCA CCCGCCGGGG TGTGGTGACG
GCGGTGAGCC AGGTGAACCT CACCCTCGCC AAGGGCGAGA CCCTCGGCAT CGTGGGCGAG
AGCGGCTCGG GCAAGTCGGT GACCTCCTAC ACGGTCATGC GCATCCTCGA CCGGGCCGGG
CGCATCGCGG AAGGCTCCAT CACCTTCTCG GGGATGGACG TGGCCCACGC CCCGGAAAGC
GCCATGCGCG ACCTGCGCGG GCGCGAGATG TCCATGATCT TCCAGAACCC GCGCGCGGCG
CTGAACCCCA TCCGCACGGT GGGCCGGCAG ATCGGCGACG TGCTGCTCCA GCACGTGCAG
GCCGACGCCC GCAACGTGAA GGAAAAGGTG ATCGACATCC TCAAGCAGGT GCGCATCGCC
CGGCCCGAGG AGCGCTACCA CGCCTATCCG TTCGAGCTGT CGGGCGGCAT GTGCCAGCGC
ATCGTCATCG CGCTGGCGCT GGCCTGCCGG CCGCAGTTGA TGATCGCCGA CGAGCCCACC
ACCGGCCTTG ACGTGACCAC CCAGAAGGCG GTGATGGACC TCGTCACCGA GCTGACGCGC
GAGCGCGGCA TGTCCACCCT CCTCATCACC CACGACCTGG GCCTTGCCGC CGCCTATTGC
GACACGGTGA TGGTGATGGA GAAGGGCAGG GTGGTGGAGA CCGCGCCGGC CGAGCGCATC
TTCCGCGATC CCCAGCACCC CTACACCCGC AAGCTGATGC GCGCGACGCC CCGCCCCGGT
ATCACGCTGA AGGATCTTCT GCCGGAAGAG CCGGACCCTC TCCCGCCTGC GGGGGAGGGC
AGGGTGGCGG CGCATGTCTC CACTCCGGCC ACGGTATCCG GCCCGGGCGC CAGCCCCCTC
CCGCATGCGG GACACGGAGC ATCCGCCGTC CCCCTCCTCA AGGTGGAAAA CCTGCTGAAG
GAATATCCCC GCCAGGGCGC GCCCTCGGCG TTCCTGTCCG GCCTCCTGGG CAAGAAGGCG
CCGCCGGAGG AGCGCATCTT CCGCGCGGTG GACGGCATCT CCTTCGAGGT GAAGAAGGGC
GAGAGCGTCG GCCTCGTGGG CGAGAGCGGC TGCGGCAAGT CCACCACCTC CACCATCGTC
ATGCGCCTCA TCGATCCCAC GGCGGGGAAG ATCACCTTCG ATGGCGAGGA CATCAGCGCC
GTCCCGGCGA AGGATTTCGC CCACCATCCC CTGCGCGGGC GCATCCAGAT GGTGTTCCAG
GACCCCACCG AGAGCCTCAA TCCCCGCTAC ACGGCGGAGC GCGCCATCGC CGATCCGCTG
CTGCGCATGG GCGGCATGTC CGGCGGGGCC AAGCTGCGCG CCCGCGTGGC GGAGCTGGCC
GAGATGGTCG GCCTGCCGCA GAACCTCCTG GAGCGCTTCC CCCACCAGCT GTCGGGCGGG
CAGAAGGCGC GCATCGGCAT CGCCCGGGCC ATCGCGCTCG ACCCCGACCT CGTCATCCTC
GACGAGCCCA CCGCCGCCCT CGACGTGTCG GTCCAGGCGG TGGTGCTCAA CCTGCTGGAA
GAGCTGAAGC AGCGCCTCGG CATGAGCTAC CTGTTCGTGT CCCACGATTT GCATGTGGTG
GGGCTGCTAT GCGATCGGGT CATCGTCATG CGGCAGGGGC GCATCGTGGA GGAGGGCAGT
TCCCAGCAGG TGCTCGACGC CCCCAAGGAC GCCTATACCC GCGAGCTGAT CGCCGCCATT
CCCCATCCTC CGGTCTGA
|
|---|
| Protein sequence | MHGVVDVTAQ AAKTSEAPSG PLLEVRDLTV EFATRRGVVT AVSQVNLTLA KGETLGIVGE
SGSGKSVTSY TVMRILDRAG RIAEGSITFS GMDVAHAPES AMRDLRGREM SMIFQNPRAA
LNPIRTVGRQ IGDVLLQHVQ ADARNVKEKV IDILKQVRIA RPEERYHAYP FELSGGMCQR
IVIALALACR PQLMIADEPT TGLDVTTQKA VMDLVTELTR ERGMSTLLIT HDLGLAAAYC
DTVMVMEKGR VVETAPAERI FRDPQHPYTR KLMRATPRPG ITLKDLLPEE PDPLPPAGEG
RVAAHVSTPA TVSGPGASPL PHAGHGASAV PLLKVENLLK EYPRQGAPSA FLSGLLGKKA
PPEERIFRAV DGISFEVKKG ESVGLVGESG CGKSTTSTIV MRLIDPTAGK ITFDGEDISA
VPAKDFAHHP LRGRIQMVFQ DPTESLNPRY TAERAIADPL LRMGGMSGGA KLRARVAELA
EMVGLPQNLL ERFPHQLSGG QKARIGIARA IALDPDLVIL DEPTAALDVS VQAVVLNLLE
ELKQRLGMSY LFVSHDLHVV GLLCDRVIVM RQGRIVEEGS SQQVLDAPKD AYTRELIAAI
PHPPV
|
|---|
| |