| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4546 |
|---|
| Symbol | |
|---|
| ID | 5423113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 5023792 |
|---|
| End bp | 5024802 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640883810 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001419424 |
|---|
| Protein GI | 154248466 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.922143 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACGCA TCCTCTTCGC AGCAGTTGGG CTTTTGTCTC TGGCCGGTGC CGTCAATGCC
GCCACGCTCG ACGAGGTCAA GGCGCGCGGC TCGGTCAACT GCGGCGTGTC GCAGGGCCTG
CCGGGCTTCT CGAGCCCGAA CGACAAGAAT GAGTGGGGCG GCCTGGACGT GGACTTCTGC
CGCGCCATTG CGGCGGCGAT CTTCAACGAT CCCGCGAAAG TGAAGTTCAG CCCGCTGTCC
GCCAAGGACC GTTTCACGGC GCTGACCTCC GGCGCCATCG ATGTGCTGTC GCGCAACACC
ACCTGGACCA TGTCGCGCGA CACCACGCTG GGATTCAACT TCGCCGGCGT GATCTATTAT
GACGGCCAGG GCTTCCTCGT GCGCAAGGCG CTGGGCCTGA AGTCGGCCAA AGAGCTGCAG
GGTGCCTCGA TCTGCGTGCA GACCGGCACC TCCAACGAGC TCAACGTGTC CGACTTCTTC
CGCTCGAACA ACATGAAGAA CGGCGAGGTG ATCGCGTTCG GCACCATCGA CGAGACGGTG
AAGGCCTATG AATCGGGCCG CTGCGACGTG TTCACCGCCG ACCGCTCCCA GCTCGCCGCC
GTGCGCCTCA AGCTGACCAA TGCCGCCGAT CACGTGATCC TGCCCGAGAC CATCTCCAAG
GAGCCCCTCG GCCCGCTGGT GCGCCATGGC GACGACCAGT GGTTCGACCT CGTGAAGTGG
GTCTATTTCG CCCTGCTCAA CGCAGAGGAA CTGGGCGTGA CCCAGAAGAA CGTGGACGAG
CAGGTCAACT CCCAGAACCC GGACGTGAAG CGCCTGCTCG GTACCGACGG CAAGTATGGC
GAGGGCATCG GCCTCACCGC CGACTGGGCG GTGCGCATCA TCAAGGCCAC CGGCAATTAC
GGCGAGATCT ACGACCGCAA CGTCGGCCCC GCCACCCCGC TCGGCATCGA GCGCGGCCTC
AACAACCTGT GGAACAAGGG CGGCATCCAG TACGGCATGC CGGTGCGCTG A
|
|---|
| Protein sequence | MKRILFAAVG LLSLAGAVNA ATLDEVKARG SVNCGVSQGL PGFSSPNDKN EWGGLDVDFC
RAIAAAIFND PAKVKFSPLS AKDRFTALTS GAIDVLSRNT TWTMSRDTTL GFNFAGVIYY
DGQGFLVRKA LGLKSAKELQ GASICVQTGT SNELNVSDFF RSNNMKNGEV IAFGTIDETV
KAYESGRCDV FTADRSQLAA VRLKLTNAAD HVILPETISK EPLGPLVRHG DDQWFDLVKW
VYFALLNAEE LGVTQKNVDE QVNSQNPDVK RLLGTDGKYG EGIGLTADWA VRIIKATGNY
GEIYDRNVGP ATPLGIERGL NNLWNKGGIQ YGMPVR
|
|---|
| |