| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4315 |
|---|
| Symbol | |
|---|
| ID | 5423683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 4783178 |
|---|
| End bp | 4786297 |
|---|
| Gene Length | 3120 bp |
|---|
| Protein Length | 1039 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640883576 |
|---|
| Product | excinuclease ABC, A subunit |
|---|
| Protein accession | YP_001419193 |
|---|
| Protein GI | 154248235 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0178] Excinuclease ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATC GCGCTTTTCC CACGCGGGCG GTTTCCGCCC CTGATACCGC CGGCCGCCGG
GACGCGCGCA CCCTGACGGT GCGCGGCGCG CGCGAGCACA ACCTCAAGAA CGTGGACCTC
GAGATCCCGC GCGACAGCCT GGTGGTCTTC ACCGGGCTCT CCGGCTCGGG CAAGAGTTCG
CTGGCCTTCG ACACGATCTA TGCCGAAGGC CAGCGCCGTT ATGTGGAAAG CCTCTCGGCC
TACGCACGGC AGTTCCTGGA GATGATGCAG AAGCCGGACG TGGACCAGAT TGATGGCTTG
TCCCCGGCCA TTTCCATCGA GCAGAAAACC ACCTCCAAGA ATCCGCGCTC CACCGTGGGC
ACGGTGACAG AGATCTACGA TTACATGCGC CTGTTGTGGG CGCGCACGGG CGTGCCCTAT
TCCCCGGCCA CCGGCCTGCC CATCGAGAGC CAGACCGTCT CCCAGATGGT GGATCGCACG
CTGGCCCTTC CGGAAGGCAC GCGCCTTTAT CTGCTGGCCC CTGTGATACG CGGACGCAAG
GGCGAATATC GCAAGGAACT CGCCGAGTGG ATGAAGAAGG GCTTCCAGCG GGTGAAGATC
GACGGCGCCT TCCACGAGAT CGCGGAGGCT CCGACCCTCG ACAAGAAGTT CAAGCACGAC
ATCGACGTGG TGGTGGACCG CATCGTGGTG CGGCCCGATC TGGCCGCGCG GCTCGCCGAC
AGTTTCGAGA CGGCGCTGGC TTTGGCGGAT GGCATCGCGG TGGCCGAGTA TGCCGATGAG
AAGGACGAGG CGGGGGCGCC GCGGCGCGTC CTGTTCTCCG AGAAGTTCGC CTGCCCGGTT
TCCGGCTTCA CCATTTCGGA GATCGAGCCG CGCCTGTTTT CCTTCAACAA TCCCTTCGGC
GCCTGCCCGG CCTGCGACGG GCTCGGCGTG GAGCAGACCA TCGATCCCGA CCTTGTGGTG
CCGGATCGGA TGCGCTCGCT GAAGCAGGGG GCCATCGCGC CATGGGCAAA GTCCACGTCG
CCCTATTATG GCCAGACGCT GGACGCGCTG GCCAAGCACT ATCATTTCAA GCTCAACGTG
CCCTTCGCCG ACCTGCCGGA ACAGGCGAAG GAGGTGTTGC TGTTCGGCTC GGGCACCGAG
AAGATCACCT TCGCCTATGA CGACGGCATG CGCGCCTACG AGACCTCCAA GACCTTCGAG
GGCGTGGTCC GCAACCTGGA TCGGCGCTGG AAGGAGACCG ACAGCGACTG GGCGCGGGAG
GAGATCTCGA AATATTTCTC CACCGTCCCG TGCAAGGCCT GTTCAGGCTA CCGCCTGAAG
CCGGAGGCCC TCGCGGTGAA GGTGGCCGGC AAGCATATCG GCGAGGTGGG AGAGCTTTCG
GTGCGGGCGG CGTCCGCTTG GTTCGAGGCC CTGCCCGGCG CGCTCACCGA CAAGCAGAAC
GAGATCGCCG GCCGGATCCT CAAGGAGATC CGTGAGCGTC TCATCTTCCT GCTGGATGTG
GGGCTGGAAT ATCTCACCCT CGCCCGCGCC TCCGGCACCC TGTCGGGCGG CGAGAGCCAG
CGCATCCGCC TTGCCTCGCA GATCGGCTCG GGCCTGACTG GCGTGCTCTA TGTGCTGGAC
GAGCCCTCCA TCGGCCTGCA CCAGCGCGAC AACGCGCGCC TTCTGGACAC GCTCAAGCAC
CTGCGCGACC TCGGCAATAC GGTGATCGTG GTGGAACACG ACGAGGACGC CATCCTCGCT
GCCGATTATG TGGTGGATGT GGGCCCCGGT GCCGGCATCC ACGGCGGCCG CATCGTCGCC
CAGGGTACTC CCGCGCAGAT CCTGGCCGAC CCCAATTCCC TCACCGGCCA GTACCTCACC
GGCCAGCTGT CCGTGGGCGT GCCGGCGCGG CGCAAGCCCA ACCCGAAACG CGTGCTCAAG
CTTTCGGGCG CGCGGGGCAA CAATCTGAAG GACGTGACGG CGGAGATACC CCTCGGCCTG
TTTACCTGCA TCACCGGCGT GTCCGGGGGG GGCAAGTCCA CTCTGCTCAT CGACACCTTG
TACAAGGCGG TGGCGCGGCG GTTGAACGGC GCCAGCGAGG CCCCGGCCCC GTTCGACCGG
CTGGAGGGGC TTGAGCACCT CGACAAGGTG ATCGACATCG ACCAGTCGCC CATCGGCCGT
ACCCCCCGCT CAAACCCGGC GACCTACACG GGTGCCTTCA CCCCCATCCG CGAATGGTTC
TCCGGCCTGC CGGAGGCCAA GGCGCGGGGC TATGGCGCCG GGCGCTTCTC CTTCAACGTG
AAAGGGGGGC GCTGCGAGGC CTGCCAGGGC GACGGCGTCA TCAAGATCGA GATGCACTTC
CTGCCGGATG TCTATGTCAC GTGCGATGTC TGCAAGGGCA AGCGCTACAA CCGCGAGACC
CTGGAGGTCA CCTTCAAGAA CAAGTCCATC GCCGACGTGC TGGACATGAC CGTGGAAGAG
GGCGCGCAGT TCTTCAAGGC GGTGCCTTCG GTCCGCGAGA AGCTGGAGAC CCTGCATCGC
GTGGGACTCG ACTATATCAA GGTAGGCCAG CAGGCGACCA CGCTCTCCGG CGGCGAAGCG
CAGCGCGTGA AGCTCTCCAA GGAGCTGTCC AAGCGCGCCA CCGGCCGCAC CCTCTACATC
CTCGACGAGC CCACCACCGG CCTGCACTTC CACGACGTGA AGAAGCTGCT CGAAGTGCTG
CATGAGCTGG TGGAGCAGGG TAATACCGTG GTGGTGATCG AGCACAATCT GGAGGTCATC
AAGACCGCCG ACTGGATCCT CGATCTCGGC CCGGAAGGGG GAGACGGCGG CGGCGAGATC
GTGGTGGCGG GCACGCCCGA GCAGGTGGCG CAGCACCCGA GGTCCCACAC CGGGCACTTC
CTGGCGGAAG TTCTGGCGCG CCGACCCTTG GTCAAGGCTG CGGCGGCGCC CTCGACGGCA
AAGGCAGCGG AGCGGAAGGC CGGCTCCCGC AACGCCTCTG CCGGGAAGAC GCCGGCATCT
GCGGAACCGG CGGCAGATTC ACAGCCTGCG GCAGAGGTCG TGGAACCGAT CGAGGACAGC
GCCAAGCTCA CCAAGACCGC CGCCCGTGGA CGGGGGCGGC GACGGCAGGC GGCGGAGTAG
|
|---|
| Protein sequence | MSDRAFPTRA VSAPDTAGRR DARTLTVRGA REHNLKNVDL EIPRDSLVVF TGLSGSGKSS
LAFDTIYAEG QRRYVESLSA YARQFLEMMQ KPDVDQIDGL SPAISIEQKT TSKNPRSTVG
TVTEIYDYMR LLWARTGVPY SPATGLPIES QTVSQMVDRT LALPEGTRLY LLAPVIRGRK
GEYRKELAEW MKKGFQRVKI DGAFHEIAEA PTLDKKFKHD IDVVVDRIVV RPDLAARLAD
SFETALALAD GIAVAEYADE KDEAGAPRRV LFSEKFACPV SGFTISEIEP RLFSFNNPFG
ACPACDGLGV EQTIDPDLVV PDRMRSLKQG AIAPWAKSTS PYYGQTLDAL AKHYHFKLNV
PFADLPEQAK EVLLFGSGTE KITFAYDDGM RAYETSKTFE GVVRNLDRRW KETDSDWARE
EISKYFSTVP CKACSGYRLK PEALAVKVAG KHIGEVGELS VRAASAWFEA LPGALTDKQN
EIAGRILKEI RERLIFLLDV GLEYLTLARA SGTLSGGESQ RIRLASQIGS GLTGVLYVLD
EPSIGLHQRD NARLLDTLKH LRDLGNTVIV VEHDEDAILA ADYVVDVGPG AGIHGGRIVA
QGTPAQILAD PNSLTGQYLT GQLSVGVPAR RKPNPKRVLK LSGARGNNLK DVTAEIPLGL
FTCITGVSGG GKSTLLIDTL YKAVARRLNG ASEAPAPFDR LEGLEHLDKV IDIDQSPIGR
TPRSNPATYT GAFTPIREWF SGLPEAKARG YGAGRFSFNV KGGRCEACQG DGVIKIEMHF
LPDVYVTCDV CKGKRYNRET LEVTFKNKSI ADVLDMTVEE GAQFFKAVPS VREKLETLHR
VGLDYIKVGQ QATTLSGGEA QRVKLSKELS KRATGRTLYI LDEPTTGLHF HDVKKLLEVL
HELVEQGNTV VVIEHNLEVI KTADWILDLG PEGGDGGGEI VVAGTPEQVA QHPRSHTGHF
LAEVLARRPL VKAAAAPSTA KAAERKAGSR NASAGKTPAS AEPAADSQPA AEVVEPIEDS
AKLTKTAARG RGRRRQAAE
|
|---|
| |