Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_4284 |
Symbol | dnaE |
ID | 5423402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 4749247 |
End bp | 4752699 |
Gene Length | 3453 bp |
Protein Length | 1150 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640883545 |
Product | DNA polymerase III subunit alpha |
Protein accession | YP_001419162 |
Protein GI | 154248204 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.166792 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGATC CCGGCTTCAT CCATCTTCAC GTCCATTCCT CCTATTCGCT GCTGGAGGGG GCGCTTTCCA TTGGCAAGCT GGCCGACCTC GTGAAGGCGG ATGCGCAGCC GGCCATTGCG CTCACCGATA CGGGCAATCT GTTCGGCGCG CTGGAATTCT CCGAGAAGAT GTCGGGCGCC GGCATCCAGC CCATCGCCGG TGTGTCCCTC GCCCTGGACC TGCCGGAGCC GGCAGGCCCG CGCGGGGCGA TCCGGCCGAA GCGGCCGCGC ATCGTGCTGC TGGCCCAGTC GGAGCCGGGC TGGCGCAACC TGATGCGACT GGTCTCCCGC TCATTTCTTG AAACCGCCAG CGAGGACGAG CCGCGCATCC TGCCCGACTG GCTGGCCGAT GCCCATGACG GCCTCATCGC CCTCACCGGC GGGCCGGCCG GCCCCATCGA CAAGGCGCTG GTGTCCGGCC ATCCGGAGCT GGCGGCGGAG CGGCTCGACC TGCTCGCCTC GCTGTTCGGC GACCGGCTCT ATGTGGAAGT TCAGCGCCAC GACACCGACG CCGAGCGCCT CGCCGAAGCC GGGCTGCTGG AACTGGCCTA TGCCAAGGGC CTTCCGCTGG TCGCGTCCAA CGAGCCCTTC TTCGCCAGCA AGACCGATTA TGAGGCCCAC GACGGGCTCC TGTGCATCGC CGAGGGCCGG CTTTTGTCGG AAGGCGACCG GCGCCGGCTG ACGCCCGAGC ACCGATTCAA GACCCGCGCG GAAATGCTCG CCCTGTTCGC CGACCTGCCC GAGGCCACGG CCAACACGGT GGAGATCGCC CGGCGCTGCG CCTACCGGGT GCGCACCGTG AAGCCCATCC TGCCGCGCTT CACCTCGGGT GGAGGGGACG GCGATCCCCT GGCCGAGGAG GCCGCCGAGC TGGAGCGGCA GGCGAAGGAG GGCCTCGCCC AGCGCCTCGA AAAGCACGGG CCGGCGCCGG GGCTGGACAT CGCCACCTAT GAGGAGCGGC TCGCCTACGA GCTTTCCGTC ATCACCAAAA TGAAGTTCCC CGGCTACTTC CTCATCGTGT CGGACTTCAT CAAGTGGGCC AAGGCCCACG ATATCCCGGT GGGGCCGGGG CGTGGATCGG GCGCCGGCTC GCTGGTGGCC TATTCGCTCC AGATCACCGA CCTCGATCCG ATCCGGTTCG GCCTGCTGTT CGAGCGGTTC CTGAACCCGG ACCGCGTGTC CATGCCCGAC TTCGACGTGG ACTTCTGCCA GGAGCGCCGC GACGAGGTGA TCCACTACGT GCAGGAGCGC TACGGCCGCG CCCAGGTGGC GCAGATCATC ACGTTCGGTA CGCTGCAGGC GCGCGGCGTG CTCCGGGACG TGGGCCGCGT GCTGGAGATG CCCTATGGGC AGGTGGACAA GCTGTGCAAG CTGGTGCCGC AGAACCCGGC CAATCCGGTC ACACTGAAGC AGGCCATCGA GGACGAGCCG CGCCTCCAGG CCTCCCGCGA CCAGGAAGAG GTGGTCAAGC GCGCCTTCGA CATCGCGGTG AGGCTGGAGG GCCTCAACCG CCACGCCTCC ACCCATGCCG CGGGCATCGT GATCGGCGAC AGGAAGCTCC ACGAGCTGGT GCCGCTCTAT CGCGATCCCA AGTCCGACAT GCCGGTCACC CAGTACAATA TGAAATGGGT GGAGCAGGCG GGCCTGGTGA AGTTCGACTT CCTGGGCCTG AAGACGCTGA CCACCATCGA CAAGGCGGTG AAGCTGATCC ACCAGCGCGG CATCGATCTG GACATCTCCA AGATCCCGCT GGACGACCCC AAGACCTACG CCATGTTGGG CAAGGGCGAG ACGGTGGGCG TGTTCCAGGT GGAAAGCGCG GGCATGCGCC GGGCGCTGGT GGACATGAAG GCCGACCGGG TCGAGGACCT GATCGCCCTC GTGGCGCTCT ACCGGCCCGG CCCCATGGCC AACATCCCGG TGTATTGCGA CTGCAAGCAC GGCCGCGCCA AGCCGGACTA TCTCCATCCC ATGCTGGAGC CGTACCTGAA GGAGACGTTC GGCGTCATCA TCTACCAGGA ACAGGTGATG CAGATCGCCC AGGCCATGGC GGGTTACTCG CTGGGCGAGG CCGACCTGCT ACGCCGCGCC ATGGGCAAGA AGATCCGCGC CGAGATGGAG AAGCAGCGCG AGCGCTTCGT CTCCGGCTCC GCTGGGCGGG GCATCGAGAA GGCGCAGGCC GACACCATCT TCGACCTTCT GGCCAAGTTC GCCGACTACG GCTTCAACAA ATCCCACGCC GCCGCCTACG CCATCGTCGC CTACCAGACG GCCTGGCTGA AGGCGAACTA CCCCACCGAA TTCCTCGCCG CCTCCATGAC CCTCGACATG GGCAACACGG ACAAGCTCGC GGAATTCCGG CAGGAGGCCC AGCGCCTCGG CATCGAGGTG GTGCCGCCTA ATATCAACCT GTCGGCCCGC GAGTTCGCGG TGAAGGACGG CAAGATCATC TACGCCATGT GCGCCATCAA GGGCGTGGGC GGGGCGGCCG TGGACGCGCT GGTGGCGGCG CGCGGTGACC GGCCGTTCCG GAGCTTCGCG GATTTCGCCT CGCGCCTGCC GGTGAAGCTG GTCAACAAGC GCACGCTGGA AAGCCTGATG GCCGCCGGCT GCTTCGACGT GCTGGAGAAG AACCGCGCCC GGGCGTTTGC CGCCATCGAA TCCATCGTGG CCGAGGCCCA GCGCGTGGAG GCGAACGCCC AGTCGGGCCA GAACGACATG TTCGGCTCCG GCCCCTCGGC GGTCTCCCTG CCCATTCCGG AGGTGGCGCC CTGGCTGCCC TCGGAGCGGC TGCAGAAGGA ATATGACGCC ATCGGCTTCT TCCTCACCGG CCATCCGCTG GACGATTATG CCGATGCGCT GAAGAAGATG CGGGTGCAGT CCTTCTCGGA CTTCTCCCGC GCCGTGCGCT CGGGCGCCGC GGCGGGGCGG CTCGCTGCCA CCGTGGTCTC CAAGCAGGAG CGGCGGACCA AGTCCGGCAC CCGCATGGGC ATCGTCGGCC TCTCCGACCC CTCGGGCCAT TACGAGGCGG TGATTTTCTC CGAAGGCCTC GCGCATTATC GCGACCTGCT GGAGCCGGGC ACGCCGCTGC TGATGATGGT GGCAGCCGAG CTGAACGGCG AGGATGTGCG CGTACGCATC AATTCCTGCG AGAAGCTGGA CCCCGTCACC GCCCGCCACC AGAAGGGCCT GCGCATCTTC CTGCGCTCCC CCGAGCCCAT CGAGGGCATC GCCCGCCGCC TCGCCGACGG CAAGACCGTG GATGCGGGCT CCGGCGAGGT CAGCCTGATC CTGATGGTGG AGGATGCCCG GGCCGAGGTG GAAGTGAGCC TGCCCGGCAA ATATCCCATC TCGCCGCAGA TCGCCGGAGC CATCAAGGCC ATTCCGGGGG TGGTCGCGAT TGAATCCGCA TAG
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Protein sequence | MPDPGFIHLH VHSSYSLLEG ALSIGKLADL VKADAQPAIA LTDTGNLFGA LEFSEKMSGA GIQPIAGVSL ALDLPEPAGP RGAIRPKRPR IVLLAQSEPG WRNLMRLVSR SFLETASEDE PRILPDWLAD AHDGLIALTG GPAGPIDKAL VSGHPELAAE RLDLLASLFG DRLYVEVQRH DTDAERLAEA GLLELAYAKG LPLVASNEPF FASKTDYEAH DGLLCIAEGR LLSEGDRRRL TPEHRFKTRA EMLALFADLP EATANTVEIA RRCAYRVRTV KPILPRFTSG GGDGDPLAEE AAELERQAKE GLAQRLEKHG PAPGLDIATY EERLAYELSV ITKMKFPGYF LIVSDFIKWA KAHDIPVGPG RGSGAGSLVA YSLQITDLDP IRFGLLFERF LNPDRVSMPD FDVDFCQERR DEVIHYVQER YGRAQVAQII TFGTLQARGV LRDVGRVLEM PYGQVDKLCK LVPQNPANPV TLKQAIEDEP RLQASRDQEE VVKRAFDIAV RLEGLNRHAS THAAGIVIGD RKLHELVPLY RDPKSDMPVT QYNMKWVEQA GLVKFDFLGL KTLTTIDKAV KLIHQRGIDL DISKIPLDDP KTYAMLGKGE TVGVFQVESA GMRRALVDMK ADRVEDLIAL VALYRPGPMA NIPVYCDCKH GRAKPDYLHP MLEPYLKETF GVIIYQEQVM QIAQAMAGYS LGEADLLRRA MGKKIRAEME KQRERFVSGS AGRGIEKAQA DTIFDLLAKF ADYGFNKSHA AAYAIVAYQT AWLKANYPTE FLAASMTLDM GNTDKLAEFR QEAQRLGIEV VPPNINLSAR EFAVKDGKII YAMCAIKGVG GAAVDALVAA RGDRPFRSFA DFASRLPVKL VNKRTLESLM AAGCFDVLEK NRARAFAAIE SIVAEAQRVE ANAQSGQNDM FGSGPSAVSL PIPEVAPWLP SERLQKEYDA IGFFLTGHPL DDYADALKKM RVQSFSDFSR AVRSGAAAGR LAATVVSKQE RRTKSGTRMG IVGLSDPSGH YEAVIFSEGL AHYRDLLEPG TPLLMMVAAE LNGEDVRVRI NSCEKLDPVT ARHQKGLRIF LRSPEPIEGI ARRLADGKTV DAGSGEVSLI LMVEDARAEV EVSLPGKYPI SPQIAGAIKA IPGVVAIESA
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